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    CG12078 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38401, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12078provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035426
    Locus tag
    Dmel_CG12078
    See related
    AllianceGenome:FB:FBgn0035426
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    24656659; Dmel\CG12078
    Summary
    Predicted to enable protein serine/threonine phosphatase activity. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12078 in Genome Data Viewer
    Location:
    63C1-63C1; 3-7 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (3243274..3244294, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (3243274..3244294, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene La-related protein 4B Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45424 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Negative modulation of bone morphogenetic protein signaling by Dullard during wing vein formation in Drosophila. Liu Z, et al. Dev Growth Differ, 2011 Aug. PMID 21790556
    2. Viability, longevity, and egg production of Drosophila melanogaster are regulated by the miR-282 microRNA. Vilmos P, et al. Genetics, 2013 Oct. PMID 23852386, Free PMC Article
    3. A large-scale resource for tissue-specific CRISPR mutagenesis in Drosophila. Port F, et al. Elife, 2020 Feb 13. PMID 32053108, Free PMC Article
    4. Identification of neural outgrowth genes using genome-wide RNAi. Sepp KJ, et al. PLoS Genet, 2008 Jul 4. PMID 18604272, Free PMC Article
    5. Genetic variation in food choice behaviour of amino acid-deprived Drosophila. Toshima N, et al. J Insect Physiol, 2014 Oct. PMID 25010547

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein serine/threonine phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables protein serine/threonine phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12078-PA
    CG12078-PB
    NP_001246593.1
    NP_647795.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      3243274..3244294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259664.1 → NP_001246593.1  uncharacterized protein Dmel_CG12078, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246593.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9NDG3
      Conserved Domains (1) summary
      TIGR02251
      Location:53 → 220
      HIF-SF_euk; Dullard-like phosphatase domain

    2. NM_139538.3 → NP_647795.2  uncharacterized protein Dmel_CG12078, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647795.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V5L7, Q9VZS0
      Conserved Domains (1) summary
      TIGR02251
      Location:70 → 237
      HIF-SF_euk; Dullard-like phosphatase domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9NDG3 M9NDG3
    Q9VZS0 Q9VZS0

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