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    zim-3 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188246, updated on 9-Dec-2024

    Summary

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    Official Symbol
    zim-3
    Official Full Name
    C2H2-type domain-containing protein
    Primary source
    WormBase:WBGene00011601
    Locus tag
    CELE_T07G12.11
    See related
    AllianceGenome:WB:WBGene00011601
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in meiotic chromosome segregation. Located in condensed nuclear chromosome. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See zim-3 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (10558715..10561429)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene C2H2-type domain-containing protein Neighboring gene pseudo Neighboring gene C2H2-type domain-containing protein Neighboring gene C2H2-type domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene conversion and positive selection driving the evolution of the Caenorhabditis ssp. ZIM/HIM-8 protein family. Liu Q. J Mol Evol, 2009 Mar. PMID 19221684
    2. Mutations in Caenorhabditis elegans him-19 show meiotic defects that worsen with age. Tang L, et al. Mol Biol Cell, 2010 Mar 15. PMID 20071466, Free PMC Article
    3. Identification of chromosome sequence motifs that mediate meiotic pairing and synapsis in C. elegans. Phillips CM, et al. Nat Cell Biol, 2009 Aug. PMID 19620970, Free PMC Article
    4. A family of zinc-finger proteins is required for chromosome-specific pairing and synapsis during meiosis in C. elegans. Phillips CM, et al. Dev Cell, 2006 Dec. PMID 17141157
    5. The Chromosome Axis Mediates Feedback Control of CHK-2 to Ensure Crossover Formation in C. elegans. Kim Y, et al. Dev Cell, 2015 Oct 26. PMID 26506311, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in meiotic chromosome segregation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in condensed nuclear chromosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in condensed nuclear chromosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C2H2-type domain-containing protein
    NP_001293985.1
    • Confirmed by transcript evidence
    NP_501953.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      10558715..10561429
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001307056.4 → NP_001293985.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293985.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A061AJC4

    2. NM_069552.3 → NP_501953.2  C2H2-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_501953.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O18065
    Nucleotide Protein
    Heading Accession and Version

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