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    str-52 7TM_GPCR_Srx domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 183493, updated on 9-Dec-2024

    Summary

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    Official Symbol
    str-52
    Official Full Name
    7TM_GPCR_Srx domain-containing protein
    Primary source
    WormBase:WBGene00006117
    Locus tag
    CELE_C45H4.12
    See related
    AllianceGenome:WB:WBGene00006117
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in chemosensory neurons; head; pharynx; tail hypodermis; and tail neurons. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See str-52 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    2
    Sequence:
    Chromosome: V; NC_003283.11 (2145485..2146144, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Gamma-glutamylcyclotransferase;glutathione-specific gamma-glutamylcyclotransferase Neighboring gene Seven TM Receptor Neighboring gene Serpentine Receptor, class BC (Class B-like) Neighboring gene FIP (Fungus-Induced Protein) Related Neighboring gene tRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Ohnishi K, et al. Nat Commun, 2024 Feb 23. PMID 38396085, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    7TM_GPCR_Srx domain-containing protein
    NP_503579.2
    • Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2145485..2146144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071178.2 → NP_503579.2  7TM_GPCR_Srx domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O44691
      Conserved Domains (1) summary
      cl22924
      Location:10 → 182
      7TM_GPCR_Srd; Serpentine type 7TM GPCR chemoreceptor Srd
    Nucleotide Protein
    Heading Accession and Version

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