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    ssp-19 Sperm-specific class P protein 19 [ Caenorhabditis elegans ]

    Gene ID: 171813, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ssp-19
    Official Full Name
    Sperm-specific class P protein 19
    Primary source
    WormBase:WBGene00006047
    Locus tag
    CELE_C55C2.2
    See related
    AllianceGenome:WB:WBGene00006047
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Enables protein homodimerization activity. Is expressed in spermatheca. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ssp-19 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003279.8 (2562668..2562997)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene DUF1073 domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene C2H2-type domain-containing protein Neighboring gene Amino Acid Transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of sperm-specific protein SSP-19 from Caenorhabditis elegans. Schormann N, et al. Acta Crystallogr D Biol Crystallogr, 2004 Oct. PMID 15388931
    2. Sperm motility and MSP. Smith H. WormBook, 2006 Feb 1. PMID 18050481, Free PMC Article
    3. MSP domain proteins show enhanced expression in male germ line cells. Tarr DE, et al. Mol Biochem Parasitol, 2004 Sep. PMID 15279955
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. x-ray crystallographic structure of sperm-specific protein SSP-19 from Caenorhabditis elegans
      Title: Structure of sperm-specific protein SSP-19 from Caenorhabditis elegans.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Sperm-specific class P protein 19
    NP_491000.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2562668..2562997
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058599.5 → NP_491000.1  Sperm-specific class P protein 19 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491000.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O01829
      Conserved Domains (1) summary
      pfam00635
      Location:3 → 99
      Motile_Sperm; MSP (Major sperm protein) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O01829.1

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