U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    arrd-15 Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15 [ Caenorhabditis elegans ]

    Gene ID: 191372, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    arrd-15
    Official Full Name
    Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15
    Primary source
    WormBase:WBGene00014033
    Locus tag
    CELE_ZK643.1
    See related
    AllianceGenome:WB:WBGene00014033
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein transport. Located in striated muscle dense body. Is expressed in ganglia; neurons; and vm1. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See arrd-15 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    10
    Sequence:
    Chromosome: III; NC_003281.10 (8930023..8936746)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Globin-like protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene G_PROTEIN_RECEP_F2_4 domain-containing protein Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The α-arrestin SUP-13/ARRD-15 promotes isoform turnover of actin-interacting protein 1 in Caenorhabditis elegans striated muscle. Lewis M, et al. PNAS Nexus, 2023 Oct. PMID 37869480, Free PMC Article
    2. Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans. Lewis JA, et al. BMC Genomics, 2009 Apr 29. PMID 19402892, Free PMC Article
    3. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in striated muscle dense body HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Arrestin C-terminal-like domain-containing protein;Arrestin domain-containing protein 15
    NP_001254968.1
    • Confirmed by transcript evidence
    NP_001254969.1
    • Confirmed by transcript evidence
    NP_001254970.1
    • Confirmed by transcript evidence
    NP_001254971.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8930023..8936746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268039.4 → NP_001254968.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254968.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      I2HAB8
      Conserved Domains (2) summary
      pfam02752
      Location:181 → 316
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      cl22903
      Location:32 → 131
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    2. NM_001268040.4 → NP_001254969.1  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254969.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      I2HAB9
      Conserved Domains (2) summary
      pfam02752
      Location:194 → 329
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      cl22903
      Location:45 → 144
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    3. NM_001268041.4 → NP_001254970.1  Arrestin domain-containing protein 15 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254970.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C9IY19, C9IY20, P30647
      Conserved Domains (2) summary
      pfam02752
      Location:198 → 330
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      cl22903
      Location:49 → 148
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    4. NM_001268042.3 → NP_001254971.1  Arrestin domain-containing protein 15 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001254971.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P30647
      Conserved Domains (2) summary
      pfam02752
      Location:166 → 298
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      cl22903
      Location:17 → 116
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P30647.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools