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    F55G1.6 RING-CH-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 259576, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F55G1.6
    Official Full Name
    RING-CH-type domain-containing protein
    Primary source
    WormBase:WBGene00018902
    Locus tag
    CELE_F55G1.6
    See related
    AllianceGenome:WB:WBGene00018902
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in virL and virR. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F55G1.6 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    5
    Sequence:
    Chromosome: IV; NC_003282.8 (7473517..7474959)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene F-box C protein Neighboring gene ncRNA Neighboring gene Serine/threonine-protein kinase plk-3 Neighboring gene SLC (SoLute Carrier) homolog Neighboring gene Putative pyrroline-5-carboxylate reductase 4 Neighboring gene Kinetochore-associated protein rod-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING-CH-type domain-containing protein
    NP_001343657.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7473517..7474959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001356926.3 → NP_001343657.1  RING-CH-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q20846
      Conserved Domains (2) summary
      cl17238
      Location:39 → 87
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
      cl19579
      Location:167 → 269
      Peptidase_U4; Sporulation factor SpoIIGA
    Nucleotide Protein
    Heading Accession and Version

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