U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    suco-1 SUN domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172011, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    suco-1
    Official Full Name
    SUN domain-containing protein
    Primary source
    WormBase:WBGene00020031
    Locus tag
    CELE_R12E2.2
    See related
    AllianceGenome:WB:WBGene00020031
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in cytoplasm and membrane. Is expressed widely. Orthologous to human SUCO (SUN domain containing ossification factor). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See suco-1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    9
    Sequence:
    Chromosome: I; NC_003279.8 (4178812..4182129)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene MPN domain-containing protein Neighboring gene ncRNA Neighboring gene MIR domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene Piwi domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Caenorhabditis elegans gene lin-44 controls the polarity of asymmetric cell divisions. Herman MA, et al. Development, 1994 May. PMID 8026318
    2. Essential genes in the hDf6 region of chromosome I in Caenorhabditis elegans. Howell AM, et al. Genetics, 1990 Nov. PMID 2249758, Free PMC Article
    3. Isolated C. elegans germ nuclei exhibit distinct genomic profiles of histone modification and gene expression. Han M, et al. BMC Genomics, 2019 Jun 17. PMID 31208332, Free PMC Article
    4. Identification of Caenorhabditis elegans genes regulating longevity using enhanced RNAi-sensitive strains. Samuelson AV, et al. Cold Spring Harb Symp Quant Biol, 2007. PMID 18419309
    5. Allelic ratios and the mutational landscape reveal biologically significant heterozygous SNVs. Chu JS, et al. Genetics, 2012 Apr. PMID 22267497, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    SUN domain-containing protein
    NP_001370471.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      4178812..4182129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001382881.2 → NP_001370471.1  SUN domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O61794
      Conserved Domains (2) summary
      PRK11633
      Location:424 → 471
      PRK11633; cell division protein DedD; Provisional
      pfam07738
      Location:144 → 272
      Sad1_UNC; Sad1 / UNC-like C-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools