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    R13A5.10 CMP/dCMP-type deaminase domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 260136, updated on 9-Dec-2024

    Summary

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    Official Symbol
    R13A5.10
    Official Full Name
    CMP/dCMP-type deaminase domain-containing protein
    Primary source
    WormBase:WBGene00020052
    Locus tag
    CELE_R13A5.10
    See related
    AllianceGenome:WB:WBGene00020052
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable guanosine deaminase activity. Predicted to be involved in purine nucleoside catabolic process. Is expressed in excretory cell and nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See R13A5.10 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    2
    Sequence:
    Chromosome: III; NC_003281.10 (7582033..7582985, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Pescadillo homolog Neighboring gene Major facilitator superfamily associated domain-containing protein Neighboring gene Polycystin cation channel PKD1/PKD2 domain-containing protein Neighboring gene Serpentine receptor class gamma Neighboring gene Serine/threonine-protein phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables guanosine deaminase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in purine nucleoside catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    CMP/dCMP-type deaminase domain-containing protein
    NP_498663.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      7582033..7582985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066262.3 → NP_498663.1  CMP/dCMP-type deaminase domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498663.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95Y87
      Conserved Domains (1) summary
      cd01285
      Location:4 → 112
      nucleoside_deaminase; Nucleoside deaminases include adenosine, guanine and cytosine deaminases. These enzymes are Zn dependent and catalyze the deamination of nucleosides. The zinc ion in the active site plays a central role in the proposed catalytic mechanism, activating a ...
    Nucleotide Protein
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