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    aat-5 Amino Acid Transporter [ Caenorhabditis elegans ]

    Gene ID: 171814, updated on 9-Dec-2024

    Summary

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    Official Symbol
    aat-5
    Official Full Name
    Amino Acid Transporter
    Primary source
    WormBase:WBGene00000006
    Locus tag
    CELE_C55C2.5
    See related
    AllianceGenome:WB:WBGene00000006
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See aat-5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    10
    Sequence:
    Chromosome: I; NC_003279.8 (2571740..2576020, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sperm-specific class P protein 19 Neighboring gene C2H2-type domain-containing protein Neighboring gene fructose-bisphosphatase Neighboring gene SSD domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional characterization of Caenorhabditis elegans heteromeric amino acid transporters. Veljkovic E, et al. J Biol Chem, 2004 Feb 27. PMID 14668347
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-alpha-amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in amino acid transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Amino Acid Transporter
    NP_491002.2
    • Product from WormBase gene class aat;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2571740..2576020 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058601.6 → NP_491002.2  Amino Acid Transporter [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491002.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZG9
      Conserved Domains (1) summary
      TIGR00911
      Location:6 → 462
      2A0308; L-type amino acid transporter

    RNA

    1. NR_131358.1 RNA Sequence

      Status: REVIEWED

    2. NR_131780.1 RNA Sequence

      Status: REVIEWED

    3. NR_131359.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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