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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001159547.2 → NP_001153019.1 BEN domain-containing protein 4 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' coding region, compared to variant 1, that results in a frameshift. It encodes isoform b which has a shorter and distinct C-terminus compared to isoform a.
- Source sequence(s)
-
AA757195, AB126829
- UniProtKB/TrEMBL
-
A0A0C4DGA9
- Related
- ENSP00000421160.1, ENST00000504360.5
- Conserved Domains (1) summary
-
- smart00338
Location:325 → 362
- BRLZ; basic region leucin zipper
-
NM_207406.4 → NP_997289.2 BEN domain-containing protein 4 isoform a
See identical proteins and their annotated locations for NP_997289.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AA757195, AB126828
- Consensus CDS
-
CCDS47048.1
- UniProtKB/Swiss-Prot
- A1A5D6, A1A5D7, C9JQZ5, Q58A26, Q58A27, Q6ZU67
- UniProtKB/TrEMBL
-
A0A0C4DGA9
- Related
- ENSP00000421169.1, ENST00000502486.6
- Conserved Domains (2) summary
-
- pfam10523
Location:414 → 489
- BEN; BEN domain
- cl21462
Location:325 → 362
- bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
42110853..42152655 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017008185.2 → XP_016863674.1 BEN domain-containing protein 4 isoform X1
- UniProtKB/Swiss-Prot
- A1A5D6, A1A5D7, C9JQZ5, Q58A26, Q58A27, Q6ZU67
- UniProtKB/TrEMBL
-
A0A0C4DGA9
- Conserved Domains (2) summary
-
- pfam10523
Location:414 → 489
- BEN; BEN domain
- cl21462
Location:325 → 362
- bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
42084790..42126591 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054349972.1 → XP_054205947.1 BEN domain-containing protein 4 isoform X1
- UniProtKB/Swiss-Prot
- A1A5D6, A1A5D7, C9JQZ5, Q58A26, Q58A27, Q6ZU67
- UniProtKB/TrEMBL
-
A0A0C4DGA9