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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029850.1Â RefSeqGene
- Range
-
5057..49196
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001297418.2 → NP_001284347.1  heterogeneous nuclear ribonucleoprotein M isoform c
See identical proteins and their annotated locations for NP_001284347.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at a downstream start codon, compared to variant 1. It encodes isoform c, which has a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AA244120, AB209733, CN350481, CN350526, HY007201
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (5) summary
-
- TIGR01628
Location:82 → 236
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12659
Location:84 → 159
- RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:519 → 595
- RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- NF033916
Location:279 → 418
- antiphage_ZorA_3; anti-phage defense ZorAB system ZorA
- cl17169
Location:1 → 27
- RRM_SF; RNA recognition motif (RRM) superfamily
-
NM_005968.5 → NP_005959.2  heterogeneous nuclear ribonucleoprotein M isoform a
See identical proteins and their annotated locations for NP_005959.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
BC000138, CN350526
- Consensus CDS
-
CCDS12203.1
- UniProtKB/Swiss-Prot
- P52272, Q15584, Q8WZ44, Q96H56, Q9BWL9, Q9Y492
- UniProtKB/TrEMBL
-
Q59ES8
- Related
- ENSP00000325376.2, ENST00000325495.9
- Conserved Domains (5) summary
-
- pfam11532
Location:41 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12659
Location:204 → 279
- RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:654 → 730
- RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- NF033916
Location:414 → 553
- antiphage_ZorA_3; anti-phage defense ZorAB system ZorA
-
NM_031203.4 → NP_112480.2  heterogeneous nuclear ribonucleoprotein M isoform b
See identical proteins and their annotated locations for NP_112480.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment in the coding region, compared to variant 1. This results in a shorter protein (isoform b), compared to isoform a.
- Source sequence(s)
-
BC008895, BC058893, CN350526, DB478004
- Consensus CDS
-
CCDS12204.1
- UniProtKB/TrEMBL
-
Q59ES8
- Related
- ENSP00000325732.2, ENST00000348943.7
- Conserved Domains (5) summary
-
- pfam11532
Location:41 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12659
Location:165 → 240
- RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:615 → 691
- RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- NF033916
Location:375 → 514
- antiphage_ZorA_3; anti-phage defense ZorAB system ZorA
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10Â Reference GRCh38.p14 Primary Assembly
- Range
-
8444975..8489114
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005272479.3 → XP_005272536.1  heterogeneous nuclear ribonucleoprotein M isoform X2
See identical proteins and their annotated locations for XP_005272536.1
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (4) summary
-
- cd12386
Location:206 → 279
- RRM2_hnRNPM_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein M (hnRNP M) and similar proteins
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:636 → 712
- RRM3_hnRNPM; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- pfam11532
Location:42 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
-
XM_005272478.4 → XP_005272535.1  heterogeneous nuclear ribonucleoprotein M isoform X1
See identical proteins and their annotated locations for XP_005272535.1
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (5) summary
-
- pfam11532
Location:41 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12659
Location:204 → 279
- RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:639 → 715
- RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- NF033916
Location:399 → 538
- antiphage_ZorA_3; anti-phage defense ZorAB system ZorA
-
XM_017026823.2 → XP_016882312.1  heterogeneous nuclear ribonucleoprotein M isoform X3
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (5) summary
-
- TIGR01628
Location:60 → 373
- PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
- cd12386
Location:206 → 279
- RRM2_hnRNPM_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein M (hnRNP M) and similar proteins
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:621 → 697
- RRM3_hnRNPM; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- pfam11532
Location:42 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
-
XM_017026824.2 → XP_016882313.1  heterogeneous nuclear ribonucleoprotein M isoform X5
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (4) summary
-
- cd12386
Location:167 → 240
- RRM2_hnRNPM_like; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein M (hnRNP M) and similar proteins
- cd12661
Location:597 → 673
- RRM3_hnRNPM; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- pfam11532
Location:42 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
- cl17169
Location:72 → 147
- RRM_SF; RNA recognition motif (RRM) superfamily
-
XM_005272480.3 → XP_005272537.1  heterogeneous nuclear ribonucleoprotein M isoform X4
See identical proteins and their annotated locations for XP_005272537.1
- UniProtKB/TrEMBL
-
Q59ES8
- Conserved Domains (5) summary
-
- pfam11532
Location:41 → 70
- HnRNP_M; Heterogeneous nuclear ribonucleoprotein M
- cd12657
Location:72 → 147
- RRM1_hnRNPM; RNA recognition motif 1 (RRM1) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12659
Location:165 → 240
- RRM2_hnRNPM; RNA recognition motif 2 (RRM2) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- cd12661
Location:600 → 676
- RRM3_hnRNPM; RNA recognition motif 3 (RRM3) found in vertebrate heterogeneous nuclear ribonucleoprotein M (hnRNP M)
- NF033916
Location:360 → 499
- antiphage_ZorA_3; anti-phage defense ZorAB system ZorA
-
XM_017026825.2 → XP_016882314.1  heterogeneous nuclear ribonucleoprotein M isoform X6
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_047438860.1 → XP_047294816.1  heterogeneous nuclear ribonucleoprotein M isoform X7
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_017026831.2 → XP_016882320.1  heterogeneous nuclear ribonucleoprotein M isoform X8
- UniProtKB/TrEMBL
-
Q7KYM9
-
XM_017026832.2 → XP_016882321.1  heterogeneous nuclear ribonucleoprotein M isoform X9
-
XM_047438861.1 → XP_047294817.1  heterogeneous nuclear ribonucleoprotein M isoform X10
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1Â Alternate T2T-CHM13v2.0
- Range
-
8432898..8476696
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054321059.1 → XP_054177034.1  heterogeneous nuclear ribonucleoprotein M isoform X2
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321058.1 → XP_054177033.1  heterogeneous nuclear ribonucleoprotein M isoform X1
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321060.1 → XP_054177035.1  heterogeneous nuclear ribonucleoprotein M isoform X3
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321062.1 → XP_054177037.1  heterogeneous nuclear ribonucleoprotein M isoform X5
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321061.1 → XP_054177036.1  heterogeneous nuclear ribonucleoprotein M isoform X4
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321063.1 → XP_054177038.1  heterogeneous nuclear ribonucleoprotein M isoform X6
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321064.1 → XP_054177039.1  heterogeneous nuclear ribonucleoprotein M isoform X7
- UniProtKB/TrEMBL
-
Q59ES8
-
XM_054321065.1 → XP_054177040.1  heterogeneous nuclear ribonucleoprotein M isoform X8
- UniProtKB/TrEMBL
-
Q7KYM9
-
XM_054321066.1 → XP_054177041.1  heterogeneous nuclear ribonucleoprotein M isoform X9
-
XM_054321067.1 → XP_054177042.1  heterogeneous nuclear ribonucleoprotein M isoform X10