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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001329963.1 → NP_001316892.1 putative ATP-dependent RNA helicase DHX57 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate splice junction compared to variant 1. The resulting isoform (2) is shorter at the N-terminus compared to isoform 1.
- Source sequence(s)
-
AC018693, KF510812
- Conserved Domains (3) summary
-
- COG1643
Location:398 → 1194
- HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
- cd14317
Location:79 → 116
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam05773
Location:144 → 317
- RWD; RWD domain
-
NM_198963.3 → NP_945314.1 putative ATP-dependent RNA helicase DHX57 isoform 1
See identical proteins and their annotated locations for NP_945314.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC018693, AF070590, BC131534, DB211450
- Consensus CDS
-
CCDS1800.1
- UniProtKB/Swiss-Prot
- A2RRC7, Q53SI4, Q6P158, Q6P9G1, Q7Z6H3, Q8NG17, Q96M33
- Related
- ENSP00000405111.2, ENST00000457308.6
- Conserved Domains (8) summary
-
- smart00356
Location:303 → 323
- ZnF_C3H1; zinc finger
- smart00487
Location:550 → 730
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:1043 → 1125
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:561 → 703
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd14317
Location:181 → 218
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam00271
Location:832 → 968
- Helicase_C; Helicase conserved C-terminal domain
- pfam05773
Location:243 → 418
- RWD; RWD domain
- pfam07717
Location:1164 → 1310
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
38797729..38875934 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011533154.3 → XP_011531456.1 putative ATP-dependent RNA helicase DHX57 isoform X1
See identical proteins and their annotated locations for XP_011531456.1
- UniProtKB/Swiss-Prot
- A2RRC7, Q53SI4, Q6P158, Q6P9G1, Q7Z6H3, Q8NG17, Q96M33
- Conserved Domains (8) summary
-
- smart00356
Location:303 → 323
- ZnF_C3H1; zinc finger
- smart00487
Location:550 → 730
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:1043 → 1125
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:561 → 703
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd14317
Location:181 → 218
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam00271
Location:832 → 968
- Helicase_C; Helicase conserved C-terminal domain
- pfam05773
Location:243 → 418
- RWD; RWD domain
- pfam07717
Location:1164 → 1310
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
-
XM_011533155.3 → XP_011531457.1 putative ATP-dependent RNA helicase DHX57 isoform X1
See identical proteins and their annotated locations for XP_011531457.1
- UniProtKB/Swiss-Prot
- A2RRC7, Q53SI4, Q6P158, Q6P9G1, Q7Z6H3, Q8NG17, Q96M33
- Conserved Domains (8) summary
-
- smart00356
Location:303 → 323
- ZnF_C3H1; zinc finger
- smart00487
Location:550 → 730
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:1043 → 1125
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:561 → 703
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd14317
Location:181 → 218
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam00271
Location:832 → 968
- Helicase_C; Helicase conserved C-terminal domain
- pfam05773
Location:243 → 418
- RWD; RWD domain
- pfam07717
Location:1164 → 1310
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
-
XM_024453215.1 → XP_024308983.1 putative ATP-dependent RNA helicase DHX57 isoform X3
- Conserved Domains (3) summary
-
- COG1643
Location:398 → 1194
- HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
- cd14317
Location:79 → 116
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam05773
Location:144 → 317
- RWD; RWD domain
-
XM_011533156.4 → XP_011531458.1 putative ATP-dependent RNA helicase DHX57 isoform X2
- Conserved Domains (8) summary
-
- smart00356
Location:303 → 323
- ZnF_C3H1; zinc finger
- smart00487
Location:550 → 730
- DEXDc; DEAD-like helicases superfamily
- smart00847
Location:1043 → 1125
- HA2; Helicase associated domain (HA2) Add an annotation
- cd00046
Location:561 → 703
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd14317
Location:181 → 218
- UBA_DHX57; UBA domain found in putative ATP-dependent RNA helicase DHX57 and similar proteins
- pfam00271
Location:832 → 968
- Helicase_C; Helicase conserved C-terminal domain
- pfam05773
Location:243 → 418
- RWD; RWD domain
- pfam07717
Location:1164 → 1310
- OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
-
XM_047446268.1 → XP_047302224.1 putative ATP-dependent RNA helicase DHX57 isoform X4
- UniProtKB/TrEMBL
-
B4DKW2
-
XM_047446269.1 → XP_047302225.1 putative ATP-dependent RNA helicase DHX57 isoform X5
- UniProtKB/TrEMBL
-
B4DKW2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
38806517..38884496 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054344467.1 → XP_054200442.1 putative ATP-dependent RNA helicase DHX57 isoform X1
- UniProtKB/Swiss-Prot
- A2RRC7, Q53SI4, Q6P158, Q6P9G1, Q7Z6H3, Q8NG17, Q96M33
-
XM_054344468.1 → XP_054200443.1 putative ATP-dependent RNA helicase DHX57 isoform X1
- UniProtKB/Swiss-Prot
- A2RRC7, Q53SI4, Q6P158, Q6P9G1, Q7Z6H3, Q8NG17, Q96M33
-
XM_054344470.1 → XP_054200445.1 putative ATP-dependent RNA helicase DHX57 isoform X3
-
XM_054344469.1 → XP_054200444.1 putative ATP-dependent RNA helicase DHX57 isoform X2
-
XM_054344471.1 → XP_054200446.1 putative ATP-dependent RNA helicase DHX57 isoform X4
- UniProtKB/TrEMBL
-
B4DKW2
-
XM_054344472.1 → XP_054200447.1 putative ATP-dependent RNA helicase DHX57 isoform X5
- UniProtKB/TrEMBL
-
B4DKW2
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_144995.2: Suppressed sequence
- Description
- NM_144995.2: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.
-
NM_145646.2: Suppressed sequence
- Description
- NM_145646.2: This RefSeq record was removed by NCBI staff. Contact [email protected] for further information.