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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001321970.2 → NP_001308899.1 small ribosomal subunit protein uS11m isoform c
Status: REVIEWED
- Source sequence(s)
-
AC013489, BC012489
- UniProtKB/TrEMBL
- Q53FX9, Q53GJ8
- Conserved Domains (2) summary
-
- cl00332
Location:84 → 192
- Ribosomal_S11; Ribosomal protein S11
- cl26081
Location:29 → 103
- Pribosyltran_N; N-terminal domain of ribose phosphate pyrophosphokinase
-
NM_001321972.2 → NP_001308901.1 small ribosomal subunit protein uS11m isoform d
Status: REVIEWED
- Source sequence(s)
-
AC013489, AC142401
- UniProtKB/Swiss-Prot
-
P82912
- Conserved Domains (1) summary
-
- cl00332
Location:50 → 158
- Ribosomal_S11; Ribosomal protein S11
-
NM_001321973.2 → NP_001308902.1 small ribosomal subunit protein uS11m isoform e
Status: REVIEWED
- Source sequence(s)
-
AB049944, AC013489, BM966864, CD172722
- UniProtKB/Swiss-Prot
-
P82912
-
NM_001321974.2 → NP_001308903.1 small ribosomal subunit protein uS11m isoform f
Status: REVIEWED
- Source sequence(s)
-
AB049944, AC013489, CD172722
- UniProtKB/Swiss-Prot
-
P82912
- Related
-
ENST00000560850.1
-
NM_001321976.2 → NP_001308905.1 small ribosomal subunit protein uS11m isoform g
Status: REVIEWED
- Source sequence(s)
-
AC013489, AC142401, CD172722
- UniProtKB/Swiss-Prot
-
P82912
-
NM_022839.5 → NP_073750.2 small ribosomal subunit protein uS11m isoform a
See identical proteins and their annotated locations for NP_073750.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the predominant variant and it encodes isoform a.
- Source sequence(s)
-
AB049944, AC013489
- Consensus CDS
-
CCDS10342.1
- UniProtKB/Swiss-Prot
- B2RD52, P82912, Q969D7, Q96GI3, Q9BYC3
- UniProtKB/TrEMBL
- Q53FX9, Q53GJ8
- Related
- ENSP00000317376.4, ENST00000325844.9
- Conserved Domains (2) summary
-
- PRK02812
Location:30 → 104
- PRK02812; ribose-phosphate pyrophosphokinase; Provisional
- cl00332
Location:85 → 193
- Ribosomal_S11; Ribosomal protein S11
-
NM_176805.4 → NP_789775.1 small ribosomal subunit protein uS11m isoform b
See identical proteins and their annotated locations for NP_789775.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame internal segment of coding sequence, compared to variant 1, which causes the predicted protein (isoform b) to be shorter than isoform a. The predicted ORF of this rare transcript has not been experimentally confirmed.
- Source sequence(s)
-
AB049944, AC013489, BC009451
- Consensus CDS
-
CCDS10343.1
- UniProtKB/TrEMBL
- Q53FX9, Q53GJ8
- Related
- ENSP00000318054.7, ENST00000353598.6
- Conserved Domains (1) summary
-
- cl00332
Location:74 → 160
- Ribosomal_S11; Ribosomal protein S11
RNA
-
NR_135915.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC013489, DA803430
-
NR_135917.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AB049944, AC013489, AC142401
-
NR_135918.2 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AB049944, AC013489, AC142401, BE621879
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
88467708..88480776
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
86222020..86235375
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054378652.1 → XP_054234627.1 small ribosomal subunit protein uS11m isoform X1
- UniProtKB/Swiss-Prot
- B2RD52, P82912, Q969D7, Q96GI3, Q9BYC3
- UniProtKB/TrEMBL
- Q53FX9, Q53GJ8