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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_008190.1 RefSeqGene
- Range
-
5198..42857
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001185039.2 → NP_001171968.1 peroxisomal acyl-coenzyme A oxidase 1 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a.
- Source sequence(s)
-
AC087289, AK296409, BC008767, BQ943492, DC297086
- UniProtKB/TrEMBL
-
B4DU07
- Conserved Domains (2) summary
-
- cd01150
Location:2 → 599
- AXO; Peroxisomal acyl-CoA oxidase
- PLN02443
Location:1 → 613
- PLN02443; acyl-coenzyme A oxidase
-
NM_004035.7 → NP_004026.2 peroxisomal acyl-coenzyme A oxidase 1 isoform a
See identical proteins and their annotated locations for NP_004026.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform a, alternately referred to as ACOX1b per PMID: 17603022.
- Source sequence(s)
-
AC087289, BC008767, BQ943492
- Consensus CDS
-
CCDS11734.1
- UniProtKB/TrEMBL
-
B4DU07
- Related
- ENSP00000293217.4, ENST00000293217.10
- Conserved Domains (2) summary
-
- cd01150
Location:3 → 637
- AXO; Peroxisomal acyl-CoA oxidase
- PLN02443
Location:5 → 651
- PLN02443; acyl-coenzyme A oxidase
-
NM_007292.6 → NP_009223.2 peroxisomal acyl-coenzyme A oxidase 1 isoform b
See identical proteins and their annotated locations for NP_009223.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. The encoded isoform (b, alternately known as ACOX1a per PMID: 17603022), is the same length as isoform a.
- Source sequence(s)
-
AC087289, AK292965, BC008767, BQ943492, DC297086
- Consensus CDS
-
CCDS11735.1
- UniProtKB/Swiss-Prot
- A8K6X8, A8KAA0, B4DK61, F5GYQ8, Q12863, Q15067, Q15068, Q15101, Q16131, Q7Z3W5, Q9UD31
- UniProtKB/TrEMBL
-
B4DU07
- Related
- ENSP00000301608.4, ENST00000301608.9
- Conserved Domains (1) summary
-
- cd01150
Location:3 → 637
- AXO; Peroxisomal acyl-CoA oxidase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
75941507..75979166 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047436183.1 → XP_047292139.1 peroxisomal acyl-coenzyme A oxidase 1 isoform X2
- UniProtKB/TrEMBL
-
B4DU07
-
XM_047436182.1 → XP_047292138.1 peroxisomal acyl-coenzyme A oxidase 1 isoform X1
- UniProtKB/TrEMBL
-
B4DU07
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
76834659..76872295 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054316337.1 → XP_054172312.1 peroxisomal acyl-coenzyme A oxidase 1 isoform X2
- UniProtKB/TrEMBL
-
B4DU07
-
XM_054316336.1 → XP_054172311.1 peroxisomal acyl-coenzyme A oxidase 1 isoform X1
- UniProtKB/TrEMBL
-
B4DU07