NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001288962.2 → NP_001275891.1 cdc42-interacting protein 4 isoform 1
See identical proteins and their annotated locations for NP_001275891.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC008760, AF502289, AY081141, CB997985, DB198268
- Consensus CDS
-
CCDS74271.1
- UniProtKB/Swiss-Prot
- B2R8A6, B7WP22, D6W645, O15184, Q15642, Q53G22, Q5TZN1, Q6FI24, Q8NFL1, Q8TCY1, Q8TDX3, Q96RJ1
- UniProtKB/TrEMBL
-
A7VJC9
- Related
- ENSP00000320117.7, ENST00000313244.14
- Conserved Domains (3) summary
-
- cd07653
Location:5 → 257
- F-BAR_CIP4-like; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins
- cd11628
Location:395 → 475
- HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
- cd11911
Location:544 → 598
- SH3_CIP4-like; Src Homology 3 domain of Cdc42-Interacting Protein 4
-
NM_001288963.3 → NP_001275892.1 cdc42-interacting protein 4 isoform 3
See identical proteins and their annotated locations for NP_001275892.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the central coding region, and uses an alternate splice site in the 3' coding region, which leads to a frameshift, compared to variant 1. The encoded isoform (3) lacks an internal segment and has a longer and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AC008760, AF380114, AK313296, AY081141, CB997985, DB198268
- Consensus CDS
-
CCDS74272.1
- UniProtKB/TrEMBL
- A7VJC9, W4VSQ9
- Related
- ENSP00000469360.1, ENST00000596758.5
- Conserved Domains (2) summary
-
- cd07653
Location:5 → 257
- F-BAR_CIP4-like; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins
- cd11628
Location:339 → 419
- HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
-
NM_004240.4 → NP_004231.1 cdc42-interacting protein 4 isoform 2
See identical proteins and their annotated locations for NP_004231.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1.
- Source sequence(s)
-
AC008760, AK313296, AY081141, CB997985, DB198268
- Consensus CDS
-
CCDS12172.1
- UniProtKB/TrEMBL
-
A7VJC9
- Related
- ENSP00000320493.6, ENST00000313285.12
- Conserved Domains (3) summary
-
- cd07653
Location:5 → 257
- F-BAR_CIP4-like; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins
- cd11628
Location:339 → 419
- HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
- cd11911
Location:488 → 542
- SH3_CIP4-like; Src Homology 3 domain of Cdc42-Interacting Protein 4
RNA
-
NR_110231.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice site at an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AB072596, AC008760, AK313296, AY081141, CB997985, DB198268
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
6739680..6751530
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006722940.2 → XP_006723003.1 cdc42-interacting protein 4 isoform X1
- Conserved Domains (2) summary
-
- cd07653
Location:5 → 257
- F-BAR_CIP4-like; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins
- cd11628
Location:395 → 475
- HR1_CIP4_FNBP1L; Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of vertebrate Cdc42-Interacting Protein 4 and FormiN Binding Protein 1-Like
-
XM_005259683.3 → XP_005259740.1 cdc42-interacting protein 4 isoform X2
- UniProtKB/TrEMBL
-
M0R2H7
- Related
- ENSP00000472580.1, ENST00000600677.5
- Conserved Domains (1) summary
-
- cd07653
Location:5 → 257
- F-BAR_CIP4-like; The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
6729071..6740925
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322670.1 → XP_054178645.1 cdc42-interacting protein 4 isoform X1
-
XM_054322671.1 → XP_054178646.1 cdc42-interacting protein 4 isoform X2
- UniProtKB/TrEMBL
-
M0R2H7