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    LINC00619 long intergenic non-protein coding RNA 619 [ Homo sapiens (human) ]

    Gene ID: 414260, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC00619provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 619provided by HGNC
    Primary source
    HGNC:HGNC:31657
    See related
    Ensembl:ENSG00000226808 AllianceGenome:HGNC:31657
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C10orf136; bA168P8.1
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00619 in Genome Data Viewer
    Location:
    10q11.21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (43845306..43850622)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (44726149..44731458)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (44340754..44346070)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378275 Neighboring gene long intergenic non-protein coding RNA 2658 Neighboring gene heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 Neighboring gene MPRA-validated peak936 silencer Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_12499 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:44358448-44358948 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:44358949-44359449 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_12564 Neighboring gene Sharpr-MPRA regulatory region 2960 Neighboring gene long intergenic non-protein coding RNA 840 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_12586 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:44372279-44372466 Neighboring gene long intergenic non-protein coding RNA 2659 Neighboring gene long intergenic non-protein coding RNA 841

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033923.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC017939
      Related
      ENST00000374432.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      43845306..43850622
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      44726149..44731458
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)