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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051656.2 RefSeqGene
- Range
-
25298..394742
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001367904.1 → NP_001354833.1 cell adhesion molecule DSCAML1 isoform 2 precursor
Status: REVIEWED
- Source sequence(s)
-
AP000757, AP002342
-
NM_001367905.1 → NP_001354834.1 cell adhesion molecule DSCAML1 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AK025940, AP000757, AP002342
-
NM_020693.4 → NP_065744.3 cell adhesion molecule DSCAML1 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AP000757, AP002342
- Consensus CDS
-
CCDS8384.2
- UniProtKB/Swiss-Prot
- G3V1B5, Q76MU9, Q8IZY3, Q8IZY4, Q8TD84, Q8WXU7, Q9ULT7
- UniProtKB/TrEMBL
-
A0A384DVL8
- Related
- ENSP00000498769.1, ENST00000651296.2
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p14 Primary Assembly
- Range
-
117427772..117817514 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011542918.2 → XP_011541220.1 cell adhesion molecule DSCAML1 isoform X2
- UniProtKB/TrEMBL
-
A0A384DVL8
- Conserved Domains (8) summary
-
- cd00096
Location:1231 → 1301
- Ig; Immunoglobulin domain
- cd05734
Location:631 → 709
- Ig7_DSCAM; Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
- smart00408
Location:164 → 225
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:531 → 610
- IG_like; Immunoglobulin like
- cd00063
Location:1308 → 1398
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:157 → 235
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:1017 → 1103
- fn3; Fibronectin type III domain
- cl11960
Location:727 → 815
- Ig; Immunoglobulin domain
-
XM_011542917.3 → XP_011541219.1 cell adhesion molecule DSCAML1 isoform X1
- UniProtKB/TrEMBL
-
A0A384DVL8
- Conserved Domains (8) summary
-
- cd00096
Location:627 → 693
- Ig; Immunoglobulin domain
- cd05734
Location:719 → 797
- Ig7_DSCAM; Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
- smart00408
Location:252 → 313
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:619 → 698
- IG_like; Immunoglobulin like
- cd00063
Location:1396 → 1486
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:245 → 323
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:1105 → 1191
- fn3; Fibronectin type III domain
- cl11960
Location:815 → 903
- Ig; Immunoglobulin domain
-
XM_011542919.2 → XP_011541221.1 cell adhesion molecule DSCAML1 isoform X3
- Conserved Domains (8) summary
-
- cd00096
Location:880 → 950
- Ig; Immunoglobulin domain
- cd05734
Location:280 → 358
- Ig7_DSCAM; Seventh immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
- smart00408
Location:92 → 150
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:180 → 259
- IG_like; Immunoglobulin like
- cd00063
Location:957 → 1047
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:263 → 358
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:666 → 752
- fn3; Fibronectin type III domain
- cl11960
Location:376 → 464
- Ig; Immunoglobulin domain
-
XM_011542924.3 → XP_011541226.1 cell adhesion molecule DSCAML1 isoform X5
- Conserved Domains (5) summary
-
- cd00096
Location:524 → 594
- Ig; Immunoglobulin domain
- cd00063
Location:601 → 691
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:8 → 101
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:310 → 396
- fn3; Fibronectin type III domain
- cl11960
Location:20 → 108
- Ig; Immunoglobulin domain
-
XM_011542921.2 → XP_011541223.1 cell adhesion molecule DSCAML1 isoform X4
- Conserved Domains (5) summary
-
- cd00096
Location:598 → 668
- Ig; Immunoglobulin domain
- cd00063
Location:675 → 765
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:82 → 175
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:384 → 470
- fn3; Fibronectin type III domain
- cl11960
Location:94 → 182
- Ig; Immunoglobulin domain
-
XM_011542925.2 → XP_011541227.1 cell adhesion molecule DSCAML1 isoform X6
- Conserved Domains (5) summary
-
- cd00096
Location:518 → 588
- Ig; Immunoglobulin domain
- cd00063
Location:595 → 685
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:2 → 95
- I-set; Immunoglobulin I-set domain
- pfam00041
Location:304 → 390
- fn3; Fibronectin type III domain
- cl11960
Location:14 → 102
- Ig; Immunoglobulin domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060935.1 Alternate T2T-CHM13v2.0
- Range
-
117444420..117833926 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054369452.1 → XP_054225427.1 cell adhesion molecule DSCAML1 isoform X2
- UniProtKB/TrEMBL
-
A0A384DVL8
-
XM_054369451.1 → XP_054225426.1 cell adhesion molecule DSCAML1 isoform X1
- UniProtKB/TrEMBL
-
A0A384DVL8
-
XM_054369453.1 → XP_054225428.1 cell adhesion molecule DSCAML1 isoform X3
-
XM_054369455.1 → XP_054225430.1 cell adhesion molecule DSCAML1 isoform X5
-
XM_054369454.1 → XP_054225429.1 cell adhesion molecule DSCAML1 isoform X4
-
XM_054369456.1 → XP_054225431.1 cell adhesion molecule DSCAML1 isoform X6