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    ZNF280A zinc finger protein 280A [ Homo sapiens (human) ]

    Gene ID: 129025, updated on 10-Dec-2024

    Summary

    Official Symbol
    ZNF280Aprovided by HGNC
    Official Full Name
    zinc finger protein 280Aprovided by HGNC
    Primary source
    HGNC:HGNC:18597
    See related
    Ensembl:ENSG00000169548 AllianceGenome:HGNC:18597
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SUHW1; ZNF280; ZNF636; 3'OY11.1
    Summary
    This gene encodes a zinc finger protein. The encoded protein contains 4 C2H2-type zinc fingers, which are commonly found in transcription factors. A variety of functions may be performed by this type of zinc finger protein, including the binding of DNA or RNA. [provided by RefSeq, Apr 2014]
    Orthologs
    NEW
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    Genomic context

    See ZNF280A in Genome Data Viewer
    Location:
    22q11.22
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (22513736..22520270, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (22936586..22943141, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (22868060..22874613, complement)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda locus Neighboring gene immunoglobulin lambda variable 7-35 (pseudogene) Neighboring gene uncharacterized LOC124905161 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr22:22874253-22875452 Neighboring gene uncharacterized LOC648691 Neighboring gene zinc finger protein 280B Neighboring gene ReSE screen-validated silencer GRCh37_chr22:22896585-22896782 Neighboring gene IGL region enhancer-blocking element 22-2 Neighboring gene PRAME nuclear receptor transcriptional regulator

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 280A
    Names
    suppressor of hairy wing homolog 1
    zinc finger protein 280
    zinc finger protein 636

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_000002.1 

      Range
      492048..498612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080740.5NP_542778.2  zinc finger protein 280A

      See identical proteins and their annotated locations for NP_542778.2

      Status: REVIEWED

      Source sequence(s)
      AC246793, BC053901, BP283207
      Consensus CDS
      CCDS13800.1
      UniProtKB/Swiss-Prot
      P59817
      UniProtKB/TrEMBL
      A0A0G2JN84, B3KS93
      Related
      ENSP00000302855.3, ENST00000302097.3
      Conserved Domains (2) summary
      sd00017
      Location:336357
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13836
      Location:47217
      DUF4195; Domain of unknown function (DUF4195)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      22513736..22520270 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 ALT_REF_LOCI_1

    Genomic

    1. NT_187629.1 Reference GRCh38.p14 ALT_REF_LOCI_1

      Range
      149393..155927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      22936586..22943141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)