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    CG40470 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3355093, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG40470provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0058470
    Locus tag
    Dmel_CG40470
    See related
    AllianceGenome:FB:FBgn0058470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG40470
    Summary
    Predicted to be active in cytoplasm; extracellular space; and membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG40470 in Genome Data Viewer
    Location:
    80F9-80F9; 3-47 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (23839860..23986410, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (23832960..23979510, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43941 Neighboring gene long non-coding RNA:CR43942 Neighboring gene long non-coding RNA:CR40053 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collapse of germline piRNAs in the absence of Argonaute3 reveals somatic piRNAs in flies. Li C, et al. Cell, 2009 May 1. PMID 19395009, Free PMC Article
    2. The genetic basis of incipient sexual isolation in Drosophila melanogaster. Yamamoto A, et al. Proc Biol Sci, 2024 Aug. PMID 39045689, Free PMC Article
    3. Genetic and Molecular Analysis of Essential Genes in Centromeric Heterochromatin of the Left Arm of Chromosome 3 in Drosophila melanogaster. Syrzycka M, et al. G3 (Bethesda), 2019 May 7. PMID 30948422, Free PMC Article
    4. Genetic screen in Drosophila melanogaster uncovers a novel set of genes required for embryonic epithelial repair. Campos I, et al. Genetics, 2010 Jan. PMID 19884309, Free PMC Article
    5. Genome-wide identification and comparative analysis of Cry toxin receptor families in 7 insect species with a focus on Spodoptera litura. Li Q, et al. Insect Sci, 2022 Jun. PMID 34405540

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    mobile_element

    • Loc: c23841633-23840764 mobile_element_type = transposon:1360{}6358
    • Loc: c23904629-23903894 mobile_element_type = transposon:Q{}6555

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables metalloaminopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    NOT enables peptidase activity IKR
    Inferred from Key Residues
    more info
    		  
    NOT enables peptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    NOT enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    NOT involved_in peptide catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    NOT involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG40470-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      23839860..23986410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001043170.2 → NP_001036635.1  uncharacterized protein Dmel_CG40470 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036635.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q500Y3, Q7PLV6
      Conserved Domains (2) summary
      pfam11838
      Location:584 → 906
      ERAP1_C; ERAP1-like C-terminal domain
      cl14813
      Location:60 → 503
      GluZincin; Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7PLV6 Q7PLV6

    Gene LinkOut

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