U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG16989 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31026, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG16989provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025621
    Locus tag
    Dmel_CG16989
    See related
    AllianceGenome:FB:FBgn0025621
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG16989; EG:34F3.4
    Summary
    Is expressed in organism. Orthologous to human HEATR6 (HEAT repeat containing 6). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG16989 in Genome Data Viewer
    Location:
    1C5-1C5; 1-0 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (793147..797061)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (687180..691094)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene twisted Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44469 Neighboring gene Retinoblastoma-family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Dosage compensation: the beginning and end of generalization. Straub T, et al. Nat Rev Genet, 2007 Jan. PMID 17173057
    2. Complexities of recapitulating polygenic effects in natural populations: replication of genetic effects on wing shape in artificially selected and wild-caught populations of Drosophila melanogaster. Pelletier K, et al. Genetics, 2023 Jul 6. PMID 36961731, Free PMC Article
    3. Lsd1 restricts the number of germline stem cells by regulating multiple targets in escort cells. Eliazer S, et al. PLoS Genet, 2014 Mar. PMID 24625679, Free PMC Article
    4. X-chromosome-wide profiling of MSL-1 distribution and dosage compensation in Drosophila. Legube G, et al. Genes Dev, 2006 Apr 1. PMID 16547175, Free PMC Article
    5. From first base: the sequence of the tip of the X chromosome of Drosophila melanogaster, a comparison of two sequencing strategies. Benos PV, et al. Genome Res, 2001 May. PMID 11337470, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG16989-PC
    CG16989-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      793147..797061
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297832.1 → NP_001284761.2  uncharacterized protein Dmel_CG16989, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O77435, Q9W5D3
      Conserved Domains (3) summary
      COG5064
      Location:721 → 830
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00044
      Location:712 → 745
      HEAT; HEAT repeat [structural motif]
      pfam13251
      Location:335 → 511
      DUF4042; Domain of unknown function (DUF4042)

    2. NM_130504.3 → NP_569860.3  uncharacterized protein Dmel_CG16989, isoform C [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O77435, Q9W5D3
      Conserved Domains (3) summary
      COG5064
      Location:721 → 830
      SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
      sd00044
      Location:712 → 745
      HEAT; HEAT repeat [structural motif]
      pfam13251
      Location:335 → 511
      DUF4042; Domain of unknown function (DUF4042)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O77435 O77435
    Q7JV48 Q7JV48
    Q9W5D3 Q9W5D3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools