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    RLK receptor lectin kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818348, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLK
    Official Full Name
    receptor lectin kinase
    Primary source
    TAIR:AT2G37710
    Locus tag
    AT2G37710
    See related
    Araport:AT2G37710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13M22.21; F13M22_21; L-type lectin receptor kinase IV.1; LecRK-IV.1; receptor lectin kinase
    Summary
    Induced in response to Salicylic acid.
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    Genomic context

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    See RLK in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (15814531..15817088, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glucose-induced degradation-like protein Neighboring gene phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase Neighboring gene Fatty acid hydroxylase superfamily Neighboring gene TRICHOME BIREFRINGENCE-LIKE 15 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of NPR1-dependent and independent genes early induced by salicylic acid treatment in Arabidopsis. Blanco F, et al. Plant Mol Biol, 2005 Dec. PMID 16307367
    2. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_129327.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to salicylic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor lectin kinase
    NP_181307.1
    • receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15814531..15817088 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129327.4 → NP_181307.1  receptor lectin kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181307.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80939, Q39139
      UniProtKB/TrEMBL
      A0A178W2M6, A0A5S9X5E3
      Conserved Domains (2) summary
      cd14066
      Location:353 → 618
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00139
      Location:24 → 277
      Lectin_legB; Legume lectin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O80939.1

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