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    cPT1 Undecaprenyl pyrophosphate synthetase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816264, updated on 18-Sep-2024

    Summary

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    Official Symbol
    cPT1
    Official Full Name
    Undecaprenyl pyrophosphate synthetase family protein
    Primary source
    TAIR:AT2G17570
    Locus tag
    AT2G17570
    See related
    Araport:AT2G17570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtcPT1; cis-prenyltransferase 1; MJB20.13; MJB20_13
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    Genomic context

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    See cPT1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (7643925..7646274)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene high mobility group B4 Neighboring gene Polynucleotide adenylyltransferase family protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. cis-prenyltransferase 3 and α/β-hydrolase are new determinants of dolichol accumulation in Arabidopsis. Gawarecka K, et al. Plant Cell Environ, 2022 Feb. PMID 34778961, Free PMC Article
    2. Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana. Surowiecki P, et al. Molecules, 2019 Jul 31. PMID 31370240, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. cis-prenyltransferase 3 and alpha/beta-hydrolase are new determinants of dolichol accumulation in Arabidopsis.
      Title: cis-prenyltransferase 3 and α/β-hydrolase are new determinants of dolichol accumulation in Arabidopsis.
    2. AtCPT1 is the first plant CPT producing long-chain polyisoprenoids that does not form a complex with the NgBR/NUS1 homologue.
      Title: Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_127311.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transferase activity, transferring alkyl or aryl (other than methyl) groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Undecaprenyl pyrophosphate synthetase family protein
    NP_565420.1
    • Undecaprenyl pyrophosphate synthetase family protein; FUNCTIONS IN: transferase activity, transferring alkyl or aryl (other than methyl) groups; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site (InterPro:IPR018520), Di-trans-poly-cis-decaprenylcistransferase-like (InterPro:IPR001441); BEST Arabidopsis thaliana protein match is: Undecaprenyl pyrophosphate synthetase family protein (TAIR:AT5G60510.1); Has 9017 Blast hits to 8995 proteins in 2779 species: Archae - 230; Bacteria - 5298; Metazoa - 197; Fungi - 223; Plants - 211; Viruses - 0; Other Eukaryotes - 2858 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7643925..7646274
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127311.5 → NP_565420.1  Undecaprenyl pyrophosphate synthetase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565420.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S2T1, Q94EZ4, Q9SHL2
      UniProtKB/TrEMBL
      A0A5S9WYW2, A0A654F4G9
      Conserved Domains (1) summary
      cd00475
      Location:42 → 283
      Cis_IPPS; Cis (Z)-Isoprenyl Diphosphate Synthases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S2T1.2

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