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    PKS2 phytochrome kinase substrate 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837989, updated on 18-Sep-2024

    Summary

    Official Symbol
    PKS2
    Official Full Name
    phytochrome kinase substrate 2
    Primary source
    TAIR:AT1G14280
    Locus tag
    AT1G14280
    See related
    Araport:AT1G14280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14L17.4; F14L17_4; phytochrome kinase substrate 2
    Summary
    Encodes phytochrome kinase substrate 2. PKS proteins are critical for hypocotyl phototropism. Forms a complex with Phot1, Phot2 and NPH3.
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    Genomic context

    See PKS2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (4877506..4879307)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene GDA1/CD39 nucleoside phosphatase family protein Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene CAAX amino terminal protease family protein Neighboring gene sphingoid base hydroxylase 2 Neighboring gene ARM repeat superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_101294.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within leaf development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within phototropism IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    phytochrome kinase substrate 2
    NP_172880.1
    • phytochrome kinase substrate 2 (PKS2); BEST Arabidopsis thaliana protein match is: phytochrome kinase substrate 1 (TAIR:AT2G02950.1); Has 337 Blast hits to 325 proteins in 29 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 6; Plants - 286; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4877506..4879307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101294.3NP_172880.1  phytochrome kinase substrate 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172880.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L8R2, Q9M9T4
      UniProtKB/TrEMBL
      A0A178W907, A0A5S9UCQ3, A0A7G2DSS7