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    ABCI12 cobalt ion transmembrane transporter [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821712, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCI12
    Official Full Name
    cobalt ion transmembrane transporter
    Primary source
    TAIR:AT3G21580
    Locus tag
    AT3G21580
    See related
    Araport:AT3G21580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette I12
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    Genomic context

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    See ABCI12 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (7601822..7603899, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene proline-rich nuclear receptor coactivator Neighboring gene Senescence/dehydration-associated protein-like protein Neighboring gene Senescence/dehydration-associated protein-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Novel Prokaryote-Type ECF/ABC Transporter Module in Chloroplast Metal Homeostasis. Voith von Voithenberg L, et al. Front Plant Sci, 2019. PMID 31736987, Free PMC Article
    2. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_113053.7

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cobalt ion transmembrane transporter
    NP_566688.4
    • cobalt ion transmembrane transporters; FUNCTIONS IN: cobalt ion transmembrane transporter activity; INVOLVED IN: cobalt ion transport, cobalamin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cobalt transport protein (InterPro:IPR003339); Has 2014 Blast hits to 2014 proteins in 922 species: Archae - 36; Bacteria - 1790; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7601822..7603899 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113053.7 → NP_566688.4  cobalt ion transmembrane transporter [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566688.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EB30, Q944H2, Q9LVE8
      UniProtKB/TrEMBL
      A0A5S9XEQ7, A0A654F9E3
      Conserved Domains (1) summary
      COG0619
      Location:109 → 381
      EcfT; Energy-coupling factor transporter transmembrane protein EcfT [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q944H2.1

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