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    outer envelope pore-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838673, updated on 18-Sep-2024

    Summary

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    Official Full Name
    outer envelope pore-like protein
    Primary source
    TAIR:AT1G20816
    Locus tag
    AT1G20816
    See related
    Araport:AT1G20816
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2D10.33; F2D10_33
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (7233654..7235128)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene F-box/associated interaction domain protein Neighboring gene F-box/associated interaction domain protein Neighboring gene FKBP-like peptidyl-prolyl cis-trans isomerase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene tRNA-Trp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_101934.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables porin activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables voltage-gated monoatomic anion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of monoatomic anion transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in etioplast membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    outer envelope pore-like protein
    NP_173505.2
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7233654..7235128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101934.3 → NP_173505.2  outer envelope pore-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173505.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZY5, Q6ID99, Q9LM70
      UniProtKB/TrEMBL
      A0A178W2U6, A0A5S9VDP0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ID99.1

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