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    CNGC17 cyclic nucleotide-gated channel 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829159, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CNGC17
    Official Full Name
    cyclic nucleotide-gated channel 17
    Primary source
    TAIR:AT4G30360
    Locus tag
    AT4G30360
    See related
    Araport:AT4G30360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCNGC17; cyclic nucleotide-gated channel 17; CYCLIC NUCLEOTIDE-GATED CHANNEL 17; F17I23.300; F17I23_300
    Summary
    member of Cyclic nucleotide gated channel family
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    Genomic context

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    See CNGC17 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (14854694..14858019, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene diacylglycerol kinase 7 Neighboring gene Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein Neighboring gene RING/U-box superfamily protein Neighboring gene Barwin-related endoglucanase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phytosulfokine Regulates Growth in Arabidopsis through a Response Module at the Plasma Membrane That Includes CYCLIC NUCLEOTIDE-GATED CHANNEL17, H+-ATPase, and BAK1. Ladwig F, et al. Plant Cell, 2015 Jun. PMID 26071421, Free PMC Article
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119182.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    cyclic nucleotide-gated channel 17
    NP_194765.2
    • cyclic nucleotide-gated channel 17 (CNGC17); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3400 Blast hits to 3264 proteins in 232 species: Archae - 0; Bacteria - 47; Metazoa - 1584; Fungi - 2; Plants - 959; Viruses - 0; Other Eukaryotes - 808 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14854694..14858019 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119182.4 → NP_194765.2  cyclic nucleotide-gated channel 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194765.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7Z0, Q9M0C4
      UniProtKB/TrEMBL
      A0A178V3I4, A0A384KXR0, A0A654FUP1, Q0WUI2
      Conserved Domains (2) summary
      PLN03192
      Location:131 → 490
      PLN03192; Voltage-dependent potassium channel; Provisional
      cd00038
      Location:481 → 612
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7Z0.1

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