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    LAC10 laccase 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831697, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LAC10
    Official Full Name
    laccase 10
    Primary source
    TAIR:AT5G01190
    Locus tag
    AT5G01190
    See related
    Araport:AT5G01190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7J8.170; F7J8_170; laccase 10
    Summary
    putative laccase, a member of laccase family of genes (17 members in Arabidopsis).
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    Genomic context

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    See LAC10 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (72292..74769)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene peptide transporter 5 Neighboring gene pseudo Neighboring gene Duplicated homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene HXXXD-type acyl-transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Laccases and Peroxidases Co-Localize in Lignified Secondary Cell Walls throughout Stem Development. Hoffmann N, et al. Plant Physiol, 2020 Oct. PMID 32699027, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342578.1
    NM_120197.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydroquinone:oxygen oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laccase 10
    NP_195739.2
    • laccase 10 (LAC10); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT2G38080.1); Has 9531 Blast hits to 8327 proteins in 1383 species: Archae - 24; Bacteria - 3756; Metazoa - 439; Fungi - 3375; Plants - 1571; Viruses - 0; Other Eukaryotes - 366 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      72292..74769
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120197.4 → NP_195739.2  laccase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195739.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q6ID18, Q9LFB7
      UniProtKB/TrEMBL
      A0A178U8N5, A0A5S9Y111
      Conserved Domains (4) summary
      cd13849
      Location:27 → 143
      CuRO_1_LCC_plant; The first cupredoxin domain of plant laccases
      cd13875
      Location:158 → 305
      CuRO_2_LCC_plant; The second cupredoxin domain of the plant laccases
      cd13897
      Location:404 → 541
      CuRO_3_LCC_plant; The third cupredoxin domain of the plant laccases
      TIGR03389
      Location:22 → 558
      laccase; laccase, plant

    2. NM_001342578.1 → NP_001332650.1  laccase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U8N5, A0A1R7T3A1, A0A5S9Y111
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6ID18.1

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