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    Fes1C Fes1C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831805, updated on 18-Sep-2024

    Summary

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    Official Symbol
    Fes1C
    Official Full Name
    Fes1C
    Primary source
    TAIR:AT5G02150
    Locus tag
    AT5G02150
    See related
    Araport:AT5G02150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7H20.200; T7H20_200
    Summary
    Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
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    Genomic context

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    See Fes1C in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (424291..426378, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene one helix protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene Transmembrane amino acid transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001036745.2
    NM_001342648.1
    NM_120293.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fes1C
    NP_001031822.1
    • Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.3); Has 563 Blast hits to 561 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 152; Plants - 168; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
    NP_195835.1
    • Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 582 Blast hits to 579 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 170; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      424291..426378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120293.3 → NP_195835.1  Fes1C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195835.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y2V2, Q9LZL7
      Conserved Domains (3) summary
      cd00020
      Location:99 → 208
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam08609
      Location:9 → 95
      Fes1; Nucleotide exchange factor Fes1
      sd00043
      Location:94 → 126
      ARM; armadillo repeat [structural motif]

    2. NM_001036745.2 → NP_001031822.1  Fes1C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031822.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y2V2, F4KAZ8
      Conserved Domains (3) summary
      cd00020
      Location:60 → 169
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam08609
      Location:4 → 56
      Fes1; Nucleotide exchange factor Fes1
      sd00043
      Location:55 → 87
      ARM; armadillo repeat [structural motif]

    3. NM_001342648.1 → NP_001332564.1  Fes1C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y2V2, Q9LZL7
    Nucleotide Protein
    Heading Accession and Version

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