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    Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831482, updated on 18-Sep-2024

    Summary

    Official Full Name
    Galactose oxidase/kelch repeat superfamily protein
    Primary source
    TAIR:AT5G02980
    Locus tag
    AT5G02980
    See related
    Araport:AT5G02980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15A17.10; F15A17_10
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (697993..699000)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Tudor/PWWP/MBT superfamily protein Neighboring gene Ribosomal protein S12/S23 family protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene galactose oxidase/kelch repeat protein Neighboring gene galactose oxidase/kelch repeat protein

    General gene information

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Galactose oxidase/kelch repeat superfamily protein
    NP_195918.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G03000.1); Has 1509 Blast hits to 1431 proteins in 114 species: Archae - 6; Bacteria - 112; Metazoa - 223; Fungi - 29; Plants - 1128; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      697993..699000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120376.1NP_195918.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195918.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LYY7
      UniProtKB/TrEMBL
      A0A654FY80
      Conserved Domains (4) summary
      smart00612
      Location:116161
      Kelch; Kelch domain
      sd00038
      Location:99148
      Kelch; KELCH repeat [structural motif]
      pfam00646
      Location:1359
      F-box; F-box domain
      pfam01344
      Location:150183
      Kelch_1; Kelch motif