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    CCB3 cofactor assembly, complex C (B6F) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833608, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CCB3
    Official Full Name
    cofactor assembly, complex C (B6F)
    Primary source
    TAIR:AT5G36120
    Locus tag
    AT5G36120
    See related
    Araport:AT5G36120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cofactor assembly; atylmg3; cofactor assembly; complex C (B6F); complex C (B6F)''; MAB16.6; MAB16_6; YLMG3
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    Genomic context

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    See CCB3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (14198586..14199431, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene cytochrome P450, family 716, subfamily A, polypeptide 1 Neighboring gene pseudo Neighboring gene Cytochrome P450 superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel pathway of cytochrome c biogenesis is involved in the assembly of the cytochrome b6f complex in arabidopsis chloroplasts. Lezhneva L, et al. J Biol Chem, 2008 Sep 5. PMID 18593701, Free PMC Article
    2. In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. Friso G, et al. Plant Cell, 2004 Feb. PMID 14729914, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123003.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cytochrome b6f complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast thylakoid membrane HDA PubMed 

    General protein information

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    Preferred Names
    cofactor assembly, complex C (B6F)
    NP_198461.2
    • ''cofactor assembly, complex C (B6F)'' (CCB3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast thylakoid membrane, chloroplast; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14198586..14199431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123003.4 → NP_198461.2  cofactor assembly, complex C (B6F) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198461.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RWM7, Q9LVY6
      UniProtKB/TrEMBL
      A0A178UCR5, A0A7G2FIK4
      Conserved Domains (1) summary
      pfam02325
      Location:89 → 157
      YGGT; YGGT family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RWM7.1

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