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    nuclear polyadenylated RNA-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835155, updated on 18-Sep-2024

    Summary

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    Official Full Name
    nuclear polyadenylated RNA-binding protein
    Primary source
    TAIR:AT5G50830
    Locus tag
    AT5G50830
    See related
    Araport:AT5G50830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K7B16.5; K7B16_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (20683262..20684890)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene translocase inner membrane subunit 8 Neighboring gene NAC domain containing protein 97 Neighboring gene alpha-taxilin-like protein Neighboring gene Transketolase family protein Neighboring gene Protein kinase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036974.1
    NM_124461.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nuclear polyadenylated RNA-binding protein
    NP_001032051.1
    • unknown protein; Has 4750 Blast hits to 3160 proteins in 341 species: Archae - 14; Bacteria - 239; Metazoa - 1329; Fungi - 394; Plants - 197; Viruses - 79; Other Eukaryotes - 2498 (source: NCBI BLink).
    NP_199896.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 4984 Blast hits to 3288 proteins in 342 species: Archae - 12; Bacteria - 257; Metazoa - 1366; Fungi - 452; Plants - 199; Viruses - 77; Other Eukaryotes - 2621 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20683262..20684890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124461.4 → NP_199896.1  nuclear polyadenylated RNA-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199896.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULP0, A0A5S9YDK0, A0A654G9U5, Q9FGQ0

    2. NM_001036974.1 → NP_001032051.1  nuclear polyadenylated RNA-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032051.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178ULP0, A0A5S9YDK0, F4KAF8
    Nucleotide Protein
    Heading Accession and Version

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