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    GUS1 glucuronidase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836246, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GUS1
    Official Full Name
    glucuronidase 1
    Primary source
    TAIR:AT5G61250
    Locus tag
    AT5G61250
    See related
    Araport:AT5G61250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGUS1; glucuronidase 1; MFB13.2; MFB13_2
    Summary
    Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-beta-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.
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    Genomic context

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    See GUS1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (24632154..24635312, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene soluble N-ethylmaleimide-sensitive factor adaptor protein 33 Neighboring gene LYR family of Fe/S cluster biogenesis protein Neighboring gene Ankyrin repeat family protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Plant calmodulin-binding protein-like protein Neighboring gene phytochrome-interacting factor7 Neighboring gene Remorin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of AtGUS1 and AtGUS2 in Arabidopsis root apex by a highly sensitive TSA-MISH method. Bruno L, et al. Int J Dev Biol, 2015. PMID 26505256
    2. Characterization of Arabidopsis AtUGT85A and AtGUS gene families and their expression in rapidly dividing tissues. Woo HH, et al. Genomics, 2007 Jul. PMID 17498920, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001345460.1
    NM_125518.5
    NM_180907.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-glucuronidase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glucuronidase 1
    NP_200933.2
    • glucuronidase 1 (GUS1); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_851238.1
    • glucuronidase 1 (GUS1); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 2 (TAIR:AT5G07830.1); Has 384 Blast hits to 378 proteins in 72 species: Archae - 0; Bacteria - 40; Metazoa - 184; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24632154..24635312 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125518.5 → NP_200933.2  glucuronidase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200933.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L608, Q9FLK8
      UniProtKB/TrEMBL
      A0A178UBZ8, A0A384LHC0, A0A7G2FHX1, B9DH99
      Conserved Domains (1) summary
      pfam03662
      Location:26 → 343
      Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

    2. NM_180907.3 → NP_851238.1  glucuronidase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851238.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L608, Q9FLK8
      UniProtKB/TrEMBL
      A0A178UBZ8, A0A384LHC0, A0A7G2FHX1, B9DH99
      Conserved Domains (1) summary
      pfam03662
      Location:26 → 343
      Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

    3. NM_001345460.1 → NP_001330163.1  glucuronidase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L608, Q9FLK8
      UniProtKB/TrEMBL
      A0A178UBZ8, A0A384LHC0, A0A7G2FHX1, B9DH99
      Conserved Domains (1) summary
      pfam03662
      Location:26 → 343
      Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L608.1

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