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    ZIP12 zinc transporter 12 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836336, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ZIP12
    Official Full Name
    zinc transporter 12 precursor
    Primary source
    TAIR:AT5G62160
    Locus tag
    AT5G62160
    See related
    Araport:AT5G62160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtZIP12; MTG10.20; MTG10_20; zinc transporter 12 precursor
    Summary
    member of Fe(II) transporter isolog family
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    Genomic context

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    See ZIP12 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (24960107..24961864)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ATP-dependent Clp protease ATP-binding subunit Neighboring gene peptidoglycan-binding LysM domain-containing protein Neighboring gene ncRNA Neighboring gene AGAMOUS-like 42

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of putative target genes of bZIP19, a transcription factor essential for Arabidopsis adaptation to Zn deficiency in roots. Inaba S, et al. Plant J, 2015 Oct. PMID 26306426
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables metal ion transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables zinc ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in zinc ion transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    zinc transporter 12 precursor
    NP_201022.1
    • zinc transporter 12 precursor (ZIP12); FUNCTIONS IN: cation transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: zinc transporter 1 precursor (TAIR:AT3G12750.1); Has 2095 Blast hits to 1976 proteins in 316 species: Archae - 2; Bacteria - 158; Metazoa - 583; Fungi - 630; Plants - 500; Viruses - 0; Other Eukaryotes - 222 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24960107..24961864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125609.2 → NP_201022.1  zinc transporter 12 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201022.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FIS2
      UniProtKB/TrEMBL
      A0A178UGP0, A0A5S9YGB0
      Conserved Domains (1) summary
      cl00437
      Location:32 → 355
      Zip; ZIP Zinc transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIS2.1

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