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    clpP ATP-dependent Clp protease proteolytic subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844734, updated on 18-Sep-2024

    Summary

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    Gene symbol
    clpP
    Gene description
    ATP-dependent Clp protease proteolytic subunit
    Locus tag
    ArthCp048
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See clpP in Genome Data Viewer
    Sequence:
    NC_000932.1 (69910..71882, complement)

    NC_000932.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L20 Neighboring gene ribosomal protein S12 Neighboring gene ribosomal protein S12 Neighboring gene photosystem II 47 kDa protein Neighboring gene photosystem II protein T

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000932.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A nuclear-encoded ClpP subunit of the chloroplast ATP-dependent Clp protease is essential for early development in Arabidopsis thaliana. Zheng B, et al. Planta, 2006 Oct. PMID 16705403
    2. Functional analysis of the Arabidopsis thaliana CHLOROPLAST BIOGENESIS 19 pentatricopeptide repeat editing protein. Ramos-Vega M, et al. New Phytol, 2015 Oct. PMID 25980341
    3. The chloroplastic DEVH-box RNA helicase INCREASED SIZE EXCLUSION LIMIT 2 involved in plasmodesmata regulation is required for group II intron splicing. Carlotto N, et al. Plant Cell Environ, 2016 Jan. PMID 26147377
    4. Subunit stoichiometry, evolution, and functional implications of an asymmetric plant plastid ClpP/R protease complex in Arabidopsis. Olinares PD, et al. Plant Cell, 2011 Jun. PMID 21712416, Free PMC Article
    5. Structures, Functions, and Interactions of ClpT1 and ClpT2 in the Clp Protease System of Arabidopsis Chloroplasts. Kim J, et al. Plant Cell, 2015 May. PMID 25921872, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data determine the exact subunit composition and stoichiometry for the intact core and each ring of the chloroplast ClpP/R protease.
      Title: Subunit stoichiometry, evolution, and functional implications of an asymmetric plant plastid ClpP/R protease complex in Arabidopsis.
    2. Lines with > 90% loss of wild type levels of ClpP4 protein were severely bleached and strongly retarded in vegetative growth, failing to reach reproductive maturity.
      Title: A nuclear-encoded ClpP subunit of the chloroplast ATP-dependent Clp protease is essential for early development in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    ATP-dependent Clp protease proteolytic subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000932.1 Reference assembly

      Range
      69910..71882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_051083.1 ATP-dependent Clp protease proteolytic subunit (chloroplast) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_051083.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P56772, Q3ZVD5, Q9XQZ9
      UniProtKB/TrEMBL
      A0A1B1W4W5, A0A8F5GGG1
      Conserved Domains (1) summary
      CHL00028
      Location:1 → 196
      clpP; ATP-dependent Clp protease proteolytic subunit
    Nucleotide Protein
    Heading Accession and Version

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