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    Fabp7 fatty acid binding protein 7, brain [ Mus musculus (house mouse) ]

    Gene ID: 12140, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fabp7provided by MGI
    Official Full Name
    fatty acid binding protein 7, brainprovided by MGI
    Primary source
    MGI:MGI:101916
    See related
    Ensembl:ENSMUSG00000019874 AllianceGenome:MGI:101916
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MRG; Blbp; BFABP; B-FABP
    Summary
    Predicted to enable fatty acid binding activity. Acts upstream of or within cell proliferation in forebrain; neurogenesis; and prepulse inhibition. Located in several cellular components, including cell projection; cell-cell junction; and neuronal cell body. Is expressed in several structures, including central nervous system; gut; olfactory system; peripheral nervous system; and retina. Orthologous to human FABP7 (fatty acid binding protein 7). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in CNS E18 (RPKM 518.0), CNS E14 (RPKM 302.8) and 4 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fabp7 in Genome Data Viewer
    Location:
    10 B4; 10 29.25 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (57661019..57664546)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (57784923..57788450)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene protein kinase inhibitor beta, cAMP dependent, testis specific Neighboring gene predicted gene, 18253 Neighboring gene STARR-positive B cell enhancer mm9_chr10:57463328-57463629 Neighboring gene STARR-seq mESC enhancer starr_26751 Neighboring gene peptidylprolyl isomerase A pseudogene 10_506.1 Neighboring gene sphingomyelin phosphodiesterase, acid-like 3A Neighboring gene predicted gene, 53585 Neighboring gene STARR-seq mESC enhancer starr_26752 Neighboring gene double homeobox protein 4-like protein 4

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables fatty acid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables fatty acid binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell proliferation in forebrain IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in epithelial cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in fatty acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within prepulse inhibition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within startle response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cell periphery IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell projection IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cell-cell junction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in neuronal cell body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    fatty acid-binding protein, brain
    Names
    brain lipid-binding protein
    brain-type fatty acid-binding protein
    fatty acid-binding protein 7
    mammary-derived growth inhibitor-related

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_021272.3NP_067247.1  fatty acid-binding protein, brain

      See identical proteins and their annotated locations for NP_067247.1

      Status: VALIDATED

      Source sequence(s)
      AK021271
      Consensus CDS
      CCDS23856.1
      UniProtKB/Swiss-Prot
      P51880, Q4FJK4
      UniProtKB/TrEMBL
      Q5NDA4
      Related
      ENSMUSP00000020024.6, ENSMUST00000020024.12
      Conserved Domains (1) summary
      pfam00061
      Location:8119
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      57661019..57664546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)