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    Fst follistatin [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24373, updated on 27-Nov-2024

    Summary

    Symbol
    Fstprovided by RGD
    Full Name
    follistatinprovided by RGD
    Primary source
    RGD:2633
    See related
    EnsemblRapid:ENSRNOG00000011631 AllianceGenome:RGD:2633
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    FS; FOL1; Fst-288; RATFOL1
    Summary
    Enables heparan sulfate proteoglycan binding activity. Involved in cellular response to growth factor stimulus and response to organic cyclic compound. Predicted to be located in cytoplasm and nucleus. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in polycystic ovary syndrome. Orthologous to human FST (follistatin). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Uterus (RPKM 36.4), Muscle (RPKM 32.2) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Fst in Genome Data Viewer
    Location:
    2q14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (47856345..47863670, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (46123260..46130584, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (46537589..46544813, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene ARF like GTPase 15 Neighboring gene uncharacterized LOC120100716 Neighboring gene transfer RNA threonine (anticodon AGU) 8 Neighboring gene NADH:ubiquinone oxidoreductase subunit S4 Neighboring gene uncharacterized LOC120100717 Neighboring gene uncharacterized LOC103691459 Neighboring gene developmental pluripotency-associated protein 4-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables activin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables activin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables activin binding TAS
    Traceable Author Statement
    more info
    PubMed 
    enables activin receptor antagonist activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables heparan sulfate proteoglycan binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within BMP signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of ameloblast differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular response to growth factor stimulus IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within female gonad development ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within gamete generation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within hair follicle morphogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hematopoietic progenitor cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within keratinocyte proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of activin receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of activin receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of epithelial cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of follicle-stimulating hormone secretion TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in negative regulation of transcription by RNA polymerase II ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within odontogenesis of dentin-containing tooth ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within pattern specification process ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of hair follicle development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of BMP signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in response to organic cyclic compound IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    acts_upstream_of_or_within skeletal system development ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    follistatin
    Names
    activin-binding protein
    follistatin-A

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_012561.4NP_036693.1  follistatin precursor

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000002
      UniProtKB/Swiss-Prot
      P21674, Q80XW7
      Related
      ENSRNOP00000015680.1, ENSRNOT00000015680.6
      Conserved Domains (2) summary
      smart00274
      Location:94117
      FOLN; Follistatin-N-terminal domain-like
      smart00280
      Location:117164
      KAZAL; Kazal type serine protease inhibitors

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      47856345..47863670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006231953.5XP_006232015.1  follistatin isoform X1

      Conserved Domains (2) summary
      smart00274
      Location:94117
      FOLN; Follistatin-N-terminal domain-like
      smart00280
      Location:117164
      KAZAL; Kazal type serine protease inhibitors
    2. XM_006231954.5XP_006232016.1  follistatin isoform X2

      Conserved Domains (2) summary
      smart00274
      Location:94117
      FOLN; Follistatin-N-terminal domain-like
      smart00280
      Location:117164
      KAZAL; Kazal type serine protease inhibitors