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    Gls protein (DUF810) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816520, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Gls protein (DUF810)
    Primary source
    TAIR:AT2G20010
    Locus tag
    AT2G20010
    See related
    Araport:AT2G20010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T2G17.19; T2G17_19
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (8637663..8641631, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pathogenesis-related protein-1-like protein Neighboring gene CDC27 family protein Neighboring gene RNA-binding CRS1 / YhbY (CRM) domain-containing protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001084453.2
    NM_127559.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Gls protein (DUF810)
    NP_001077922.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G25800.1); Has 178 Blast hits to 167 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    NP_179591.2
    • CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT2G25800.1); Has 170 Blast hits to 161 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      8637663..8641631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001084453.2 → NP_001077922.1  Gls protein (DUF810) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077922.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EVY9, A0A7G2EDF8, Q9SL80
      Conserved Domains (1) summary
      pfam05664
      Location:15 → 717
      DUF810; Plant family of unknown function (DUF810)

    2. NM_127559.2 → NP_179591.2  Gls protein (DUF810) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179591.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EDF8, A8MR32
      Conserved Domains (1) summary
      pfam05664
      Location:1 → 599
      DUF810; Plant family of unknown function (DUF810)
    Nucleotide Protein
    Heading Accession and Version

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