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    B3 domain-containing protein REM13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817001, updated on 18-Sep-2024

    Summary

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    Official Full Name
    B3 domain-containing protein REM13
    Primary source
    TAIR:AT2G24650
    Locus tag
    AT2G24650
    See related
    Araport:AT2G24650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25P17.5; F25P17_5
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (10483253..10487773, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-specific protease 19 Neighboring gene Transcriptional factor B3 family protein Neighboring gene pseudo Neighboring gene B3 domain protein (DUF313) Neighboring gene transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana. Manrique S, et al. Plant Mol Biol, 2023 Jun. PMID 37171544, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana.
      Title: Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001335950.1
    NM_128026.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    B3 domain-containing protein REM13
    NP_180041.5
    • DNA binding;DNA binding;sequence-specific DNA binding transcription factors; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: transcriptional factor B3 family protein (TAIR:AT2G24680.1); Has 1264 Blast hits to 283 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1262; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10483253..10487773 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001335945.1 → NP_001325060.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B205, A0A5S9X166

    2. NM_001335946.1 → NP_001325061.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B214, A0A5S9X166

    3. NM_001335948.1 → NP_001325063.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B255, A0A5S9X166, A0A654F6J2
      Conserved Domains (1) summary
      smart01019
      Location:458 → 550
      B3; B3 DNA binding domain

    4. NM_001335947.1 → NP_001325062.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VL49, A0A1P8B219

    5. NM_001335949.1 → NP_001325064.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B216, A0A5S9X166

    6. NM_128026.6 → NP_180041.5  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180041.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IPS4, P0CAP5, Q9SJA0
      UniProtKB/TrEMBL
      A0A5S9X166
      Conserved Domains (1) summary
      smart01019
      Location:305 → 397
      B3; B3 DNA binding domain

    7. NM_001335950.1 → NP_001325065.1  B3 domain-containing protein REM13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VL49, A0A1P8B210
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P0CAP5.2

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