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    scpl31 serine carboxypeptidase-like 31 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837649, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl31
    Official Full Name
    serine carboxypeptidase-like 31
    Primary source
    TAIR:AT1G11080
    Locus tag
    AT1G11080
    See related
    Araport:AT1G11080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    serine carboxypeptidase-like 31; T19D16.4; T19D16_4
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    Genomic context

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    See scpl31 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (3694328..3698013, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene WAPL (Wings apart-like protein regulation of heterochromatin) protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene ncRNA Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein Neighboring gene LisH and RanBPM domains containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001198028.1
    NM_100981.4

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 31
    NP_001184957.1
    • serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1).
    NP_172575.2
    • serine carboxypeptidase-like 31 (scpl31); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 30 (TAIR:AT4G15100.1); Has 3569 Blast hits to 3515 proteins in 359 species: Archae - 0; Bacteria - 168; Metazoa - 632; Fungi - 857; Plants - 1467; Viruses - 0; Other Eukaryotes - 445 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3694328..3698013 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100981.4 → NP_172575.2  serine carboxypeptidase-like 31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172575.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4FVT3, O04084
      UniProtKB/TrEMBL
      A0A178WDL2, A0A5S9TU26
      Conserved Domains (1) summary
      pfam00450
      Location:55 → 485
      Peptidase_S10; Serine carboxypeptidase

    2. NM_001198028.1 → NP_001184957.1  serine carboxypeptidase-like 31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184957.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I7C9
      Conserved Domains (1) summary
      pfam00450
      Location:55 → 485
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O04084.2

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