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    phosphotransferases/inositol or phosphatidylinositol kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829764, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phosphotransferases/inositol or phosphatidylinositol kinase
    Primary source
    TAIR:AT4G36080
    Locus tag
    AT4G36080
    See related
    Araport:AT4G36080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    34
    Sequence:
    Chromosome: 4; NC_003075.7 (17059779..17078039, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene endonuclease/exonuclease/phosphatase family protein Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene calcium-dependent protein kinase 18 Neighboring gene oxidoreductase, 2OG-Fe(II) oxygenase family protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Adaptor Protein ENY2 Is a Component of the Deubiquitination Module of the Arabidopsis SAGA Transcriptional Co-activator Complex but not of the TREX-2 Complex. Pfab A, et al. J Mol Biol, 2018 May 11. PMID 29588169
    2. Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. Wu CJ, et al. Mol Plant, 2021 Jul 5. PMID 33737195
    3. The Arabidopsis NuA4 histone acetyltransferase complex is required for chlorophyll biosynthesis and photosynthesis. Zhou JX, et al. J Integr Plant Biol, 2022 Apr. PMID 35043580
    4. The PEAT protein complexes are required for histone deacetylation and heterochromatin silencing. Tan LM, et al. EMBO J, 2018 Oct 1. PMID 30104406, Free PMC Article
    5. A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding. Luo YX, et al. EMBO J, 2020 Apr 1. PMID 32115743, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001204004.1
    NM_001204005.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of SAGA-type complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of Swr1 complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phosphotransferases/inositol or phosphatidylinositol kinase
    NP_001190933.1
    • phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1).
    NP_001190934.1
    • phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), PIK-related kinase (InterPro:IPR014009), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1).
    NP_680770.2
    • phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403), PIK-related kinase, FAT (InterPro:IPR003151), Armadillo-type fold (InterPro:IPR016024), PIK-related kinase (InterPro:IPR014009), PIK-related kinase, FATC (InterPro:IPR003152), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein with FAT domain (TAIR:AT2G17930.1); Has 2274 Blast hits to 1876 proteins in 234 species: Archae - 0; Bacteria - 2; Metazoa - 856; Fungi - 668; Plants - 248; Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17059779..17078039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_148404.4 → NP_680770.2  phosphotransferases/inositol or phosphatidylinositol kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_680770.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UW69, F4JPL2
      Conserved Domains (3) summary
      cd05163
      Location:3458 → 3746
      PIKK_TRRAP; Pseudokinase domain of TRansformation/tRanscription domain-Associated Protein
      pfam02259
      Location:2776 → 3116
      FAT; FAT domain
      pfam02260
      Location:3803 → 3834
      FATC; FATC domain

    2. NM_001204004.1 → NP_001190933.1  phosphotransferases/inositol or phosphatidylinositol kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190933.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UW69, F4JPL0
      Conserved Domains (3) summary
      cd05163
      Location:3428 → 3716
      PIKK_TRRAP; Pseudokinase domain of TRansformation/tRanscription domain-Associated Protein
      pfam02259
      Location:2746 → 3086
      FAT; FAT domain
      pfam02260
      Location:3773 → 3804
      FATC; FATC domain

    3. NM_001204005.1 → NP_001190934.1  phosphotransferases/inositol or phosphatidylinositol kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190934.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UW69, F4JPL1
      Conserved Domains (3) summary
      cd05163
      Location:3433 → 3721
      PIKK_TRRAP; Pseudokinase domain of TRansformation/tRanscription domain-Associated Protein
      pfam02259
      Location:2751 → 3091
      FAT; FAT domain
      pfam02260
      Location:3778 → 3809
      FATC; FATC domain
    Nucleotide Protein
    Heading Accession and Version

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