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    OSB3 organellar single-stranded DNA binding protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834508, updated on 18-Sep-2024

    Summary

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    Official Symbol
    OSB3
    Official Full Name
    organellar single-stranded DNA binding protein 3
    Primary source
    TAIR:AT5G44785
    Locus tag
    AT5G44785
    See related
    Araport:AT5G44785
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    organellar single-stranded DNA binding protein 3
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    Genomic context

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    See OSB3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (18069449..18073129, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene C2 domain-containing protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene high molecular weight subunit-like glutenin Neighboring gene copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) Neighboring gene chromatin remodeling 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The plant-specific ssDNA binding protein OSB1 is involved in the stoichiometric transmission of mitochondrial DNA in Arabidopsis. Zaegel V, et al. Plant Cell, 2006 Dec. PMID 17189341, Free PMC Article
    2. Plant organellar DNA polymerases repair double-stranded breaks by microhomology-mediated end-joining. García-Medel PL, et al. Nucleic Acids Res, 2019 Apr 8. PMID 30698803, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123846.4
    NM_203156.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables single-stranded DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    organellar single-stranded DNA binding protein 3
    NP_568639.1
    • organellar single-stranded DNA binding protein 3 (OSB3); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 9 (TAIR:AT4G20010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974885.1
    • organellar single-stranded DNA binding protein 3 (OSB3); FUNCTIONS IN: single-stranded DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Primosome PriB/single-strand DNA-binding (InterPro:IPR000424); BEST Arabidopsis thaliana protein match is: plastid transcriptionally active 9 (TAIR:AT4G20010.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18069449..18073129 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123846.4 → NP_568639.1  organellar single-stranded DNA binding protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568639.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48581, Q8GWJ4, Q8LFC9
      UniProtKB/TrEMBL
      A0A178U7W9, A0A5S9YB86
      Conserved Domains (1) summary
      cl09930
      Location:122 → 176
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.

    2. NM_203156.2 → NP_974885.1  organellar single-stranded DNA binding protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974885.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U7W9, A0A5S9YB86, F4KBP3
      Conserved Domains (1) summary
      cl09930
      Location:122 → 176
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GWJ4.1

    Gene LinkOut

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