PSBX photosystem II subunit X [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: PSBX
Official Full Name: photosystem II subunit X
Primary source: TAIR:AT2G06520
Locus tag: AT2G06520
See related: Araport:AT2G06520
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: photosystem II subunit X; PSII-X; T12H3.7; T12H3_7
Summary: Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.
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Genomic context

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See PSBX in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 1

Sequence:: Chromosome: 2; NC_003071.7 (2587729..2588448, complement)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Reduction of PsbX leads to reduced levels of functional assembled PSII core complexes, while the light-harvesting antennae are not affected.
Title: Antisense inhibition of the PsbX protein affects PSII integrity in the higher plant Arabidopsis thaliana.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

At-8BJ-068 (e-PCR)
- UniSTS:229422

MASC_STS17694 (e-PCR)
- UniSTS:258980

Homology

Orthologs from OrthoDB

NM_126649.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in chloroplast thylakoid membrane	HDA more info	PubMed

General protein information

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Preferred Names: photosystem II subunit X

NP_565335.1

photosystem II subunit X (PSBX); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: photosynthesis; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Photosystem II protein PsbX (InterPro:IPR009518); Has 63 Blast hits to 63 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

2587729..2588448 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_126649.3 → NP_565335.1 photosystem II subunit X [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_565335.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178W0Y5, Q9SKI3

Conserved Domains (1) summary

PLN00088
Location:24 → 115

PLN00088; predicted protein; Provisional