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    Tapetum specific protein TAP35/TAP44 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834481, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Tapetum specific protein TAP35/TAP44
    Primary source
    TAIR:AT5G44540
    Locus tag
    AT5G44540
    See related
    Araport:AT5G44540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MFC16.22; MFC16_22
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (17941287..17941646, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene target of AVRB operation1 Neighboring gene NagB/RpiA/CoA transferase-like superfamily protein Neighboring gene Subtilase family protein Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_123821.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Tapetum specific protein TAP35/TAP44
    NP_199267.1
    • Tapetum specific protein TAP35/TAP44; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Tapetum specific TAP35TAP44 (InterPro:IPR009891); BEST Arabidopsis thaliana protein match is: Tapetum specific protein TAP35/TAP44 (TAIR:AT4G20420.1); Has 22 Blast hits to 22 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      17941287..17941646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123821.1 → NP_199267.1  Tapetum specific protein TAP35/TAP44 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199267.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FDL5, Q9FI11
      Conserved Domains (1) summary
      pfam07265
      Location:1 → 119
      TAP35_44; Tapetum specific protein TAP35/TAP44
    Nucleotide Protein
    Heading Accession and Version

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