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    Serine/threonine-protein kinase Rio1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817038, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Serine/threonine-protein kinase Rio1
    Primary source
    TAIR:AT2G24990
    Locus tag
    AT2G24990
    See related
    Araport:AT2G24990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F27C12.9; F27C12_9
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (10625163..10628598)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene spindle/kinetochore-associated protein Neighboring gene Proline-rich extensin-like family protein Neighboring gene WRKY DNA-binding protein 60 Neighboring gene Aminotransferase-like, plant mobile domain family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128057.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Serine/threonine-protein kinase Rio1
    NP_180071.1
    • Serine/threonine-protein kinase Rio1; FUNCTIONS IN: protein serine/threonine kinase activity, catalytic activity, ATP binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RIO-like kinase (InterPro:IPR018934), Serine/threonine-protein kinase Rio1 (InterPro:IPR017407), RIO kinase (InterPro:IPR000687), RIO kinase, conserved site (InterPro:IPR018935), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Serine/threonine-protein kinase Rio1 (TAIR:AT5G37350.1); Has 22840 Blast hits to 11518 proteins in 923 species: Archae - 425; Bacteria - 1111; Metazoa - 8928; Fungi - 2169; Plants - 1017; Viruses - 356; Other Eukaryotes - 8834 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10625163..10628598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128057.3 → NP_180071.1  Serine/threonine-protein kinase Rio1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180071.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VU15, Q9SK34
      Conserved Domains (1) summary
      cd05147
      Location:167 → 356
      RIO1_euk; Catalytic domain of the atypical protein serine kinase, Eukaryotic RIO1 kinase
    Nucleotide Protein
    Heading Accession and Version

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