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    hypothetical protein (Domain of unknown function DUF220) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817313, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (Domain of unknown function DUF220)
    Primary source
    TAIR:AT2G27670
    Locus tag
    AT2G27670
    See related
    Araport:AT2G27670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F15K20.23; F15K20_23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (11801568..11802891, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Ubiquitin carboxyl-terminal hydrolase-related protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene NAD(P)-linked oxidoreductase superfamily protein Neighboring gene cytochrome P450, family 94, subfamily C, polypeptide 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (Domain of unknown function DUF220)
    NP_180335.2
    • Domain of unknown function DUF220; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11801568..11802891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128326.2 → NP_180335.2  hypothetical protein (Domain of unknown function DUF220) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180335.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VN58, A0A5S9X1S7, F4IGQ5
      Conserved Domains (1) summary
      pfam02713
      Location:170 → 242
      DUF220; Domain of unknown function DUF220
    Nucleotide Protein
    Heading Accession and Version

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