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    Tetrapyrrole (Corrin/Porphyrin) Methylase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829307, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Tetrapyrrole (Corrin/Porphyrin) Methylase
    Primary source
    TAIR:AT4G31790
    Locus tag
    AT4G31790
    See related
    Araport:AT4G31790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F11C18.6
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (15377158..15379025)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene peroxidase superfamily protein Neighboring gene debranching enzyme 1 Neighboring gene monogalactosyl diacylglycerol synthase 1 Neighboring gene ncRNA Neighboring gene WRKY DNA-binding protein 18

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_119328.4
    NM_202926.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables diphthine methyl ester synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein histidyl modification to diphthamide IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein histidyl modification to diphthamide ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Tetrapyrrole (Corrin/Porphyrin) Methylase
    NP_194907.1
    • Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 1000 Blast hits to 999 proteins in 351 species: Archae - 460; Bacteria - 44; Metazoa - 134; Fungi - 154; Plants - 44; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
    NP_974655.1
    • Tetrapyrrole (Corrin/Porphyrin) Methylases; FUNCTIONS IN: methyltransferase activity, diphthine synthase activity; INVOLVED IN: peptidyl-diphthamide biosynthetic process from peptidyl-histidine, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Diphthine synthase (InterPro:IPR004551), Tetrapyrrole methylase (InterPro:IPR000878), Tetrapyrrole methylase, subdomain 1 (InterPro:IPR014777), Tetrapyrrole methylase, subdomain 2 (InterPro:IPR014776); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15377158..15379025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119328.4 → NP_194907.1  Tetrapyrrole (Corrin/Porphyrin) Methylase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194907.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81769
      UniProtKB/TrEMBL
      A0A178V0J3, A0A5S9XYL2, A0A654FUQ3
      Conserved Domains (1) summary
      PTZ00175
      Location:1 → 273
      PTZ00175; diphthine synthase; Provisional

    2. NM_202926.2 → NP_974655.1  Tetrapyrrole (Corrin/Porphyrin) Methylase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974655.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81769
      UniProtKB/TrEMBL
      A0A178V0J3, A0A5S9XYL2, A0A654FUQ3
      Conserved Domains (1) summary
      PTZ00175
      Location:1 → 273
      PTZ00175; diphthine synthase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O81769.1

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