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    SAP7 A20/AN1-like zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 826812, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAP7
    Official Full Name
    A20/AN1-like zinc finger family protein
    Primary source
    TAIR:AT4G12040
    Locus tag
    AT4G12040
    See related
    Araport:AT4G12040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtSAP7; F16J13.110; F16J13_110; stress-associated protein 7
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    Genomic context

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    See SAP7 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (7214577..7216715)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene protein kinase family protein Neighboring gene bile acid transporter 5 Neighboring gene ncRNA Neighboring gene Putative AT-hook DNA-binding family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Profiling of the Receptor for Activated C Kinase 1a (RACK1a) interaction network in Arabidopsis thaliana. Guo J, et al. Biochem Biophys Res Commun, 2019 Dec 3. PMID 31606202
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_117274.3
    NM_179033.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    A20/AN1-like zinc finger family protein
    NP_192941.1
    • A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G22820.2); Has 1062 Blast hits to 1055 proteins in 152 species: Archae - 6; Bacteria - 0; Metazoa - 438; Fungi - 9; Plants - 479; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink).
    NP_849364.1
    • A20/AN1-like zinc finger family protein; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, A20-type (InterPro:IPR002653); BEST Arabidopsis thaliana protein match is: A20/AN1-like zinc finger family protein (TAIR:AT4G22820.2); Has 1062 Blast hits to 1055 proteins in 152 species: Archae - 6; Bacteria - 0; Metazoa - 438; Fungi - 9; Plants - 479; Viruses - 6; Other Eukaryotes - 124 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7214577..7216715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117274.3 → NP_192941.1  A20/AN1-like zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192941.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZ69
      UniProtKB/TrEMBL
      A0A178V0G6, A0A5S9XT97, B9DGJ3
      Conserved Domains (2) summary
      smart00154
      Location:116 → 153
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:18 → 39
      zf-A20; A20-like zinc finger

    2. NM_179033.1 → NP_849364.1  A20/AN1-like zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849364.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZ69
      UniProtKB/TrEMBL
      A0A178V0G6, A0A5S9XT97, B9DGJ3
      Conserved Domains (2) summary
      smart00154
      Location:116 → 153
      ZnF_AN1; AN1-like Zinc finger
      pfam01754
      Location:18 → 39
      zf-A20; A20-like zinc finger
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZ69.1

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