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    senescence regulator (Protein of unknown function, DUF584) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828802, updated on 18-Sep-2024

    Summary

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    Official Full Name
    senescence regulator (Protein of unknown function, DUF584)
    Primary source
    TAIR:AT4G26950
    Locus tag
    AT4G26950
    See related
    Araport:AT4G26950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10M23.290; F10M23_290
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (13533391..13534498, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene START (StAR-related lipid-transfer) lipid-binding domain-containing protein Neighboring gene myb domain protein 97 Neighboring gene Galactosyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene NADH:ubiquinone oxidoreductase, 17.2kDa subunit Neighboring gene aconitase 2 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001203922.2
    NM_118829.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    senescence regulator (Protein of unknown function, DUF584)
    NP_001190851.1
    • Protein of unknown function, DUF584; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G04630.1).
    NP_194425.1
    • Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT4G04630.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13533391..13534498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203922.2 → NP_001190851.1  senescence regulator (Protein of unknown function, DUF584) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190851.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0M8, Q9SZ34
      Conserved Domains (1) summary
      pfam04520
      Location:14 → 144
      Senescence_reg; Senescence regulator

    2. NM_118829.4 → NP_194425.1  senescence regulator (Protein of unknown function, DUF584) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194425.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0M8, Q9SZ34
      Conserved Domains (1) summary
      pfam04520
      Location:14 → 144
      Senescence_reg; Senescence regulator
    Nucleotide Protein
    Heading Accession and Version

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