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    Trav6-3 T cell receptor alpha variable 6-3 [ Mus musculus (house mouse) ]

    Gene ID: 328483, updated on 9-Dec-2024

    Summary

    Official Symbol
    Trav6-3provided by MGI
    Official Full Name
    T cell receptor alpha variable 6-3provided by MGI
    Primary source
    MGI:MGI:3649610
    See related
    Ensembl:ENSMUSG00000094220 IMGT/GENE-DB:TRAV6-3; AllianceGenome:MGI:3649610
    Gene type
    other
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm4; TCR; Gm193; Gm13948
    Summary
    Orthologous to human TRAV9-2 (T cell receptor alpha variable 9-2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Trav6-3 in Genome Data Viewer
    Location:
    14 C2; 14 27.36 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (53666218..53667834)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (53428761..53430377)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene T cell receptor alpha chain Neighboring gene STARR-seq mESC enhancer starr_36716 Neighboring gene STARR-seq mESC enhancer starr_36717 Neighboring gene T cell receptor alpha variable 7-2 Neighboring gene T cell receptor alpha variable 4-2 Neighboring gene T cell receptor alpha variable 7-3 Neighboring gene T cell receptor alpha variable 6-4

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_007044.1 

      Range
      1001295..1002911
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      53666218..53667834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)