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    Smim38 small integral membrane protein 38 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 246306, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smim38provided by RGD
    Official Full Name
    small integral membrane protein 38provided by RGD
    Primary source
    RGD:628800
    See related
    EnsemblRapid:ENSRNOG00000088291 AllianceGenome:RGD:628800
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Rmt1
    Summary
    Orthologous to human SMIM38 (small integral membrane protein 38). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Testes (RPKM 1.6), Uterus (RPKM 0.7) and 6 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Smim38 in Genome Data Viewer
    Location:
    1q42
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (209795854..209801269, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (200366561..200371976, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (218369204..218374619, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120099968 Neighboring gene uncharacterized LOC120099969 Neighboring gene two pore segment channel 2 Neighboring gene MAS related GPR family member F

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    small integral membrane protein 38
    Names
    mammary cancer associated protein RMT-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145088.2NP_659556.2  small integral membrane protein 38

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      Related
      ENSRNOP00000099138.1, ENSRNOT00000129770.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      209795854..209801269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)